RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA473201", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA473201 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2994015 2994015 PRJNA473201_P_NODE_15123_length_513_cov_1.277273_g14382_i0 PRJNA473201 15123 513 1.277273 6.55241049 Anneissia japonica 1529436 Echinodermata other_Eukaryota 163 7.63e-48   NR XP_033123568.1 1529436 g14382 i0 62.2 2.38011695906433 127 48 74.3 0 433 53 55 181 XP_033123568.1 60S ribosomal protein L23a-like [Anneissia japonica] diamond 1221 163 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
18945822 18945822 PRJNA473201_P_NODE_17535_length_475_cov_2.134328_g16793_i0 PRJNA473201 17535 475 2.134328 10.138058 Patiria miniata 46514 Echinodermata other_Eukaryota 170 6.41e-50   NR XP_038051326.1 46514 g16793 i0 78.4 1.83789473684211 97 21 61.3 0 5 295 150 246 XP_038051326.1 60S ribosomal protein L7-like [Patiria miniata] diamond 873 170 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
23396337 23396337 PRJNA473201_P_NODE_58699_length_270_cov_0.908629_g57957_i0 PRJNA473201 58699 270 0.908629 2.4532983 Anneissia japonica 1529436 Echinodermata other_Eukaryota 54.7 0.007   NTclustered gi|1826661981|ref|XM_033262966.1| 1529436 g57957 i0 100 0.537037037037037 29 0 11 0 77 105 641 669 PREDICTED: Anneissia japonica uncharacterized LOC117118385 (LOC117118385), mRNA blastn 145 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
28244565 28244565 PRJNA473201_P_NODE_50706_length_290_cov_1.419355_g49964_i0 PRJNA473201 50706 290 1.419355 4.1161295 Acanthaster planci 133434 Echinodermata other_Eukaryota 96.3 4.2e-21   NR XP_022105173.1 133434 g49964 i0 88.2 3.68275862068965 51 6 52.8 0 3 155 334 384 XP_022105173.1 4-hydroxyphenylpyruvate dioxygenase-like [Acanthaster planci] diamond 1068 96.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
31609413 31609413 PRJNA473201_P_NODE_85196_length_241_cov_0.916667_g84454_i0 PRJNA473201 85196 241 0.916667 2.20916747 Metazoa 33208 Echinodermata other_Eukaryota 103 1.0199999999999999e-23   NR XP_030831228.1 7668 g84454 i0 64.6 10.8174273858921 79 28 98.3 0 3 239 652 730 XP_030831228.1 probable phospholipid-transporting ATPase IIB isoform X2 [Strongylocentrotus purpuratus] diamond 2607 103 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32636635 32636635 PRJNA473201_P_NODE_83180_length_242_cov_0.911243_g82438_i0 PRJNA473201 83180 242 0.911243 2.20520806 Acanthaster planci 133434 Echinodermata other_Eukaryota 104 5.67e-24   NR XP_022106439.1 133434 g82438 i0 62.5 3.78099173553719 80 29 99.2 1 3 242 373 451 XP_022106439.1 protein DD3-3-like [Acanthaster planci] diamond 915 104 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci
32778788 32778788 PRJNA473201_P_NODE_26800_length_381_cov_1.000000_g26058_i0 PRJNA473201 26800 381 1 3.81 Metazoa 33208 Echinodermata other_Eukaryota 49.3 7.32e-4   NR XP_033640745.1 7604 g26058 i0 67.6 0.535433070866142 34 11 26.8 0 380 279 244 277 XP_033640745.1 60S acidic ribosomal protein P0-like [Asterias rubens] diamond 204 49.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;