RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA473201", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA473201 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5547897 5547897 PRJNA473201_P_NODE_66065_length_251_cov_0.865169_g65323_i0 PRJNA473201 66065 251 0.865169 2.17157419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 1.54e-26   NR KAF4690990.1 32597 g65323 i0 70.4 12.5378486055777 81 22 95.6 2 6 245 68 147 KAF4690990.1 V-type proton ATPase catalytic subunit A [Perkinsus olseni] diamond 3147 113 0.991150442477876 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
13848879 13848879 PRJNA473201_P_NODE_72631_length_248_cov_0.880000_g71889_i0 PRJNA473201 72631 248 0.88 2.1824 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 64.7 7.32e-10   NR KAF4673241.1 330153 g71889 i0 45.6 0.955645161290323 79 38 95.6 2 245 9 804 877 KAF4673241.1 Phospholipase D [Perkinsus chesapeaki] diamond 237 64.7 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
27170801 27170801 PRJNA473201_P_NODE_55142_length_279_cov_1.378641_g54400_i0 PRJNA473201 55142 279 1.378641 3.84640839 Perkinsus chesapeaki 330153 SAR_Eukaryotes SAR_Eukaryotes 84.3 2.96e-17   NR KAF4677381.1 330153 g54400 i0 49.5 3 93 39 98.9 2 278 3 72 157 KAF4677381.1 Activator of basal transcription 1 [Perkinsus chesapeaki] diamond 837 84.3 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki
30092166 30092166 PRJNA473201_P_NODE_23392_length_407_cov_1.844311_g22650_i0 PRJNA473201 23392 407 1.844311 7.50634577 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 146 2.66e-41   NR KAF4732395.1 32597 g22650 i0 67 25.7321867321867 112 37 82.6 0 407 72 88 199 KAF4732395.1 60S ribosomal protein L7A, partial [Perkinsus olseni] diamond 10473 146 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;