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contig_metadata

34 rows where bioproject = "PRJNA473201", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 34 ✖

tax_clade 1

  • Sar · 34 ✖

bioproject 1

  • PRJNA473201 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
444034 444034 PRJNA473201_P_NODE_52441_length_286_cov_1.215962_g51699_i0 PRJNA473201 52441 286 1.215962 3.47765132 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 156 3.79e-43   NR GLD98305.1 114742 g51699 i0 82.1 1.99300699300699 95 16 99.7 1 286 2 3 96 GLD98305.1 hypothetical protein PINS_up007002 [Pythium insidiosum] diamond 570 156 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
3645596 3645596 PRJNA473201_P_NODE_25463_length_391_cov_0.864780_g24721_i0 PRJNA473201 25463 391 0.86478 3.3812898 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 335 3.309999999999999e-87   NTclustered gi|2795031547|ref|XM_067929360.1| 4785 g24721 i0 85.942 7.34782608695652 313 44 80 0 79 391 317 5 Phytophthora cinnamomi 40S ribosomal protein S25 (IUM83_05233), partial mRNA blastn 2873 335 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
4271360 4271360 PRJNA473201_P_NODE_70684_length_249_cov_0.875000_g69942_i0 PRJNA473201 70684 249 0.875 2.17875 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 119 2.19e-22   NTclustered gi|2795045055|ref|XM_067937582.1| 4785 g69942 i0 91.011 32.5060240963855 89 6 35 2 12 99 226 313 Phytophthora cinnamomi ribosomal protein L34 (IUM83_12935), partial mRNA blastn 8094 119 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
4271525 4271525 PRJNA473201_P_NODE_78344_length_245_cov_0.895349_g77602_i0 PRJNA473201 78344 245 0.895349 2.19360505 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|673047800|ref|XM_008879639.1| 157072 g77602 i0 100 0.118367346938776 29 0 12 0 162 190 658 630 Aphanomyces invadans hypothetical protein mRNA blastn 29 54.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
4271607 4271607 PRJNA473201_P_NODE_81864_length_243_cov_0.905882_g81122_i0 PRJNA473201 81864 243 0.905882 2.20129326 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 228 3.389999999999999e-55   NTclustered gi|1378171545|ref|XM_024720239.1| 4781 g81122 i0 84.322 0.97119341563786 236 33 96 4 3 236 10 243 Plasmopara halstedii 60s ribosomal protein (PHALS_06874), partial mRNA blastn 236 228 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
10648129 10648129 PRJNA473201_P_NODE_67889_length_250_cov_0.870056_g67147_i0 PRJNA473201 67889 250 0.870056 2.17514 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 272 1.6e-68   NTclustered gi|301093174|ref|XM_002997390.1| 403677 g67147 i0 86.345 47.132 249 34 99 0 1 249 325 573 Phytophthora infestans T30-4 60S ribosomal protein L10 (PITG_19121), mRNA blastn 11783 272 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
13197357 13197357 PRJNA473201_P_NODE_36751_length_329_cov_1.203125_g36009_i0 PRJNA473201 36751 329 1.203125 3.95828125 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 168 6.53e-49   NR DBA03690.1 4803 g36009 i0 75.2 5.86322188449848 109 27 99.4 0 2 328 227 335 DBA03690.1 TPA: hypothetical protein N0F65_004107 [Lagenidium giganteum] diamond 1929 169 0.994082840236686 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
13848978 13848978 PRJNA473201_P_NODE_79671_length_244_cov_0.900585_g78929_i0 PRJNA473201 79671 244 0.900585 2.1974274 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 111 3.58e-20   NTclustered gi|813148855|ref|XM_012344685.1| 695850 g78929 i0 82.482 1.12295081967213 137 15 54 8 5 136 490 622 Saprolegnia parasitica CBS 223.65 50S ribosomal protein L22 mRNA blastn 274 111 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
18294900 18294900 PRJNA473201_P_NODE_11875_length_585_cov_1.353516_g11138_i0 PRJNA473201 11875 585 1.353516 7.9180686 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 139 3.46e-36   NR DBA03690.1 4803 g11138 i0 62.6 8.24102564102564 115 43 59 0 34 378 223 337 DBA03690.1 TPA: hypothetical protein N0F65_004107 [Lagenidium giganteum] diamond 4821 140 0.992857142857143 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
18296163 18296163 PRJNA473201_P_NODE_78355_length_245_cov_0.895349_g77613_i0 PRJNA473201 78355 245 0.895349 2.19360505 Plasmopara viticola 143451 SAR_Eukaryotes SAR_Eukaryotes 67.6 7.9e-7   NTclustered gi|1812102600|ref|NC_045922.1| 143451 g77613 i0 91.667 18.3387755102041 48 4 20 0 191 238 6008 6055 Plasmopara viticola mitochondrion, complete genome blastn 4493 67.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara viticola
18296171 18296171 PRJNA473201_P_NODE_79035_length_244_cov_0.900585_g78293_i0 PRJNA473201 79035 244 0.900585 2.1974274 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 185 2.0799999999999994e-42   NTclustered gi|301089745|ref|XM_002895100.1| 403677 g78293 i0 81.696 9.68032786885246 224 40 91 1 5 227 1650 1427 Phytophthora infestans T30-4 threonyl-tRNA synthetase (PITG_21071), partial mRNA blastn 2362 185 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
19569779 19569779 PRJNA473201_P_NODE_53916_length_282_cov_1.473684_g53174_i0 PRJNA473201 53916 282 1.473684 4.15578888 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 149 4.22e-41   NR TMW60420.1 41045 g53174 i0 74.2 6.92553191489362 93 24 98.9 0 2 280 154 246 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 1953 149 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
19570254 19570254 PRJNA473201_P_NODE_77696_length_245_cov_0.895349_g76954_i0 PRJNA473201 77696 245 0.895349 2.19360505 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 270 5.609999999999999e-68   NTclustered gi|2795041993|ref|XM_067924271.1| 4785 g76954 i0 86.531 5.47755102040816 245 33 100 0 1 245 517 761 Phytophthora cinnamomi AP-4 complex subunit epsilon (IUM83_00495), partial mRNA blastn 1342 270 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
24670738 24670738 PRJNA473201_P_NODE_80060_length_244_cov_0.900585_g79318_i0 PRJNA473201 80060 244 0.900585 2.1974274 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 147 9.81e-31   NTclustered gi|695403323|ref|XM_009524958.1| 67593 g79318 i0 81.081 1.51639344262295 185 33 75 2 4 187 682 865 Phytophthora sojae hypothetical protein partial mRNA blastn 370 147 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
25321153 25321153 PRJNA473201_P_NODE_47720_length_297_cov_1.375000_g46978_i0 PRJNA473201 47720 297 1.375 4.08375 Globisporangium 1448052 SAR_Eukaryotes SAR_Eukaryotes 241 5.49e-59   NTclustered gi|1780533979|gb|MK752975.1| 228749 g46978 i0 84.711 53.8013468013468 242 35 81 2 57 297 398 158 Globisporangium glomeratum isolate NESO-4_30 beta-tubulin gene, partial cds blastn 15979 241 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium glomeratum
26617533 26617533 PRJNA473201_P_NODE_73261_length_247_cov_0.885057_g72519_i0 PRJNA473201 73261 247 0.885057 2.18609079 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 102 1.69e-23   NR TMW61237.1 41045 g72519 i0 61.5 3.80161943319838 78 30 94.7 0 237 4 336 413 TMW61237.1 hypothetical protein Poli38472_013700 [Pythium oligandrum] diamond 939 102 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
26949516 26949516 PRJNA473201_P_NODE_70362_length_249_cov_0.875000_g69620_i0 PRJNA473201 70362 249 0.875 2.17875 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 141 9.3e-37   NR GLE00417.1 114742 g69620 i0 87.8 3.95180722891566 82 10 98.8 0 248 3 723 804 GLE00417.1 hypothetical protein PINS_up009174 [Pythium insidiosum] diamond 984 141 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
28355550 28355550 PRJNA473201_P_NODE_85366_length_241_cov_0.916667_g84624_i0 PRJNA473201 85366 241 0.916667 2.20916747 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 76.3 5.57e-16   NR KUF83263.1 4792 g84624 i0 94.7 9.56016597510373 38 2 47.3 0 6 119 57 94 KUF83263.1 Peptidyl-prolyl cis-trans isomerase Pin1 [Phytophthora nicotianae] diamond 2304 76.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
28387171 28387171 PRJNA473201_P_NODE_74226_length_247_cov_0.885057_g73484_i0 PRJNA473201 74226 247 0.885057 2.18609079 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 56.6 3.86e-8   NR KAH9072505.1 100861 g73484 i0 50 2.01619433198381 52 26 63.2 0 78 233 2 53 KAH9072505.1 hypothetical protein Ae201684P_022082 [Aphanomyces euteiches] diamond 498 56.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
28481985 28481985 PRJNA473201_P_NODE_33706_length_342_cov_0.977695_g32964_i0 PRJNA473201 33706 342 0.977695 3.3437169 root 1 Root_unresolved Root_unresolved 116 1.17e-27   NR TYZ66672.1 1485010 g32964 i0 67.1 18.9298245614035 79 26 69.3 0 1 237 453 531 TYZ66672.1 hypothetical protein PybrP1_000579 [[Pythium] brassicae (nom. inval.)] diamond 6474 116 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
28608255 28608255 PRJNA473201_P_NODE_47287_length_298_cov_1.333333_g46545_i0 PRJNA473201 47287 298 1.333333 3.97333234 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 135 1.97e-34   NR DAZ98414.1 4803 g46545 i0 70.1 5.39597315436242 87 26 87.6 0 287 27 595 681 DAZ98414.1 TPA: hypothetical protein N0F65_000128 [Lagenidium giganteum] diamond 1608 135 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
29239774 29239774 PRJNA473201_P_NODE_37609_length_325_cov_3.047619_g36867_i0 PRJNA473201 37609 325 3.047619 9.90476175 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 129 1.3e-34   NR KAJ8578052.1 4785 g36867 i0 67.4 9.60923076923077 95 31 87.7 0 294 10 116 210 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 3123 130 0.992307692307692 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30170850 30170850 PRJNA473201_P_NODE_66172_length_251_cov_0.865169_g65430_i0 PRJNA473201 66172 251 0.865169 2.17157419 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 120 2.55e-29   NR KAJ0407939.1 114742 g65430 i0 69.9 0.99203187250996006 83 25 99.2 0 250 2 556 638 KAJ0407939.1 hypothetical protein ATCC90586_006311 [Pythium insidiosum] diamond 249 120 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30377125 30377125 PRJNA473201_P_NODE_76872_length_245_cov_1.290698_g76130_i0 PRJNA473201 76872 245 1.290698 3.1622101 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 90.9 3.8e-21   NR XP_008877611.1 157072 g76130 i0 76.7 3.77142857142857 60 13 73.5 1 64 243 1 59 XP_008877611.1 hypothetical protein H310_12365 [Aphanomyces invadans] diamond 924 90.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
30534647 30534647 PRJNA473201_P_NODE_41913_length_311_cov_2.546218_g41171_i0 PRJNA473201 41913 311 2.546218 7.91873798 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 1.73e-33   NR TMW56563.1 41045 g41171 i0 74.2 6.23151125401929 93 24 89.7 0 279 1 567 659 TMW56563.1 hypothetical protein Poli38472_006573 [Pythium oligandrum] diamond 1938 132 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30550021 30550021 PRJNA473201_P_NODE_68853_length_250_cov_0.870056_g68111_i0 PRJNA473201 68853 250 0.870056 2.17514 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 101 9.37e-23   NR TMW64773.1 41045 g68111 i0 64.6 0.984 82 29 98.4 0 3 248 340 421 TMW64773.1 hypothetical protein Poli38472_011653 [Pythium oligandrum] diamond 246 101 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30565945 30565945 PRJNA473201_P_NODE_66173_length_251_cov_0.865169_g65431_i0 PRJNA473201 66173 251 0.865169 2.17157419 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 111 3.28e-27   NR DBA02606.1 4803 g65431 i0 73.8 2.00796812749004 84 21 99.2 1 250 2 142 225 DBA02606.1 TPA: hypothetical protein N0F65_011978 [Lagenidium giganteum] diamond 504 111 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
30581490 30581490 PRJNA473201_P_NODE_84873_length_241_cov_0.916667_g84131_i0 PRJNA473201 84873 241 0.916667 2.20916747 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 115 6.44e-29   NR TYZ59289.1 1485010 g84131 i0 73.8 1.95435684647303 80 21 99.6 0 1 240 166 245 TYZ59289.1 hypothetical protein PybrP1_006565 [[Pythium] brassicae (nom. inval.)] diamond 471 115 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
30692593 30692593 PRJNA473201_P_NODE_83733_length_242_cov_0.911243_g82991_i0 PRJNA473201 83733 242 0.911243 2.20520806 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 66.6 1.37e-10   NR TMW66751.1 41045 g82991 i0 65.9 2.49173553719008 41 14 50.8 0 3 125 173 213 TMW66751.1 hypothetical protein Poli38472_014063 [Pythium oligandrum] diamond 603 67 0.994029850746269 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
31103275 31103275 PRJNA473201_P_NODE_50715_length_290_cov_1.419355_g49973_i0 PRJNA473201 50715 290 1.419355 4.1161295 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 119 1.26e-30   NR KAJ8578052.1 4785 g49973 i0 62.1 8.81379310344828 87 33 90 0 25 285 116 202 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 2556 119 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
31118566 31118566 PRJNA473201_P_NODE_46735_length_299_cov_1.831858_g45993_i0 PRJNA473201 46735 299 1.831858 5.47725542 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 50.4 1.14e-4   NR OQR97336.1 1202772 g45993 i0 44.4 0.812709030100334 81 45 81.3 0 243 1 28 108 OQR97336.1 60S ribosomal protein L7 [Achlya hypogyna] diamond 243 50.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
31498439 31498439 PRJNA473201_P_NODE_21876_length_422_cov_1.297994_g21134_i0 PRJNA473201 21876 422 1.297994 5.47753468 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 87 6.14e-17   NR XP_009825362.1 112090 g21134 i0 47.9 1.33649289099526 94 43 66.1 3 422 144 331 419 XP_009825362.1 hypothetical protein H257_03107 [Aphanomyces astaci] diamond 564 87 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
31830560 31830560 PRJNA473201_P_NODE_34437_length_338_cov_2.320755_g33695_i0 PRJNA473201 34437 338 2.320755 7.8441519 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 161 1.3899999999999996e-43   NR TMW56563.1 41045 g33695 i0 79.8 3.71005917159763 104 21 92.3 0 313 2 567 670 TMW56563.1 hypothetical protein Poli38472_006573 [Pythium oligandrum] diamond 1254 161 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
32794092 32794092 PRJNA473201_P_NODE_81280_length_243_cov_0.905882_g80538_i0 PRJNA473201 81280 243 0.905882 2.20129326 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 46.6 0.0017   NR KAJ0399628.1 114742 g80538 i0 87.5 0.592592592592593 24 3 29.6 0 243 172 1203 1226 KAJ0399628.1 hypothetical protein P43SY_008825 [Pythium insidiosum] diamond 144 46.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;