RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where bioproject = "PRJNA473201", tax_clade = "Sar" and tax_phylum = "Endomyxa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 22 ✖

tax_clade 1

  • Sar · 22 ✖

bioproject 1

  • PRJNA473201 · 22 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1719396 1719396 PRJNA473201_P_NODE_78762_length_244_cov_1.046784_g78020_i0 PRJNA473201 78762 244 1.046784 2.55415296 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 115 6.56e-30   NR CEP01997.1 37360 g78020 i0 71.1 4.70901639344262 76 22 93.4 0 229 2 1 76 CEP01997.1 hypothetical protein PBRA_002262 [Plasmodiophora brassicae] diamond 1149 115 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
5548236 5548236 PRJNA473201_P_NODE_81485_length_243_cov_0.905882_g80743_i0 PRJNA473201 81485 243 0.905882 2.20129326 Phytomyxea 2779609 SAR_Eukaryotes SAR_Eukaryotes 125 2.88e-31   NR CEO96359.1 37360 g80743 i0 72.5 4.9382716049382704 80 22 98.8 0 241 2 502 581 CEO96359.1 hypothetical protein PBRA_005030 [Plasmodiophora brassicae] diamond 1200 125 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
6821195 6821195 PRJNA473201_P_NODE_25746_length_389_cov_0.974684_g25004_i0 PRJNA473201 25746 389 0.974684 3.79152076 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 201 9.369999999999999e-61   NR CEP01299.1 37360 g25004 i0 74.4 6.94087403598972 129 33 99.5 0 387 1 57 185 CEP01299.1 hypothetical protein PBRA_001905 [Plasmodiophora brassicae] diamond 2700 201 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
6821882 6821882 PRJNA473201_P_NODE_6306_length_813_cov_1.772973_g5682_i0 PRJNA473201 6306 813 1.772973 14.41427049 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 332 1.44e-111   NR CEP01968.1 37360 g5682 i0 68.2 6.06642066420664 239 70 88.2 1 812 96 12 244 CEP01968.1 hypothetical protein PBRA_002233 [Plasmodiophora brassicae] diamond 4932 332 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
6822102 6822102 PRJNA473201_P_NODE_73566_length_247_cov_0.885057_g72824_i0 PRJNA473201 73566 247 0.885057 2.18609079 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 116 1.14e-28   NR CEP02402.1 37360 g72824 i0 64.2 0.983805668016194 81 29 98.4 0 2 244 273 353 CEP02402.1 hypothetical protein PBRA_008986 [Plasmodiophora brassicae] diamond 243 116 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
9371438 9371438 PRJNA473201_P_NODE_30768_length_356_cov_2.176678_g30026_i0 PRJNA473201 30768 356 2.176678 7.74897368 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 163 1.1599999999999999e-47   NR CEP01968.1 37360 g30026 i0 71.7 1.94662921348315 113 30 95.2 1 16 354 1 111 CEP01968.1 hypothetical protein PBRA_002233 [Plasmodiophora brassicae] diamond 693 163 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
18294923 18294923 PRJNA473201_P_NODE_13075_length_555_cov_1.831950_g12336_i0 PRJNA473201 13075 555 1.83195 10.1673225 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 234 5.59e-76   NR CEO97530.1 37360 g12336 i0 80.7 0.756756756756757 140 27 75.7 0 555 136 12 151 CEO97530.1 hypothetical protein PBRA_000875 [Plasmodiophora brassicae] diamond 420 234 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
21496165 21496165 PRJNA473201_P_NODE_19297_length_450_cov_1.509284_g18555_i0 PRJNA473201 19297 450 1.509284 6.791778 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 117 3.23e-30   NR SPQ93437.1 37360 g18555 i0 63.2 1.74 87 32 58 0 393 133 58 144 SPQ93437.1 unnamed protein product [Plasmodiophora brassicae] diamond 783 117 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
24670035 24670035 PRJNA473201_P_NODE_44980_length_304_cov_1.389610_g44238_i0 PRJNA473201 44980 304 1.38961 4.2244144 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 114 8.500000000000001e-30   NR SPQ93437.1 37360 g44238 i0 61.9 1.65789473684211 84 32 82.9 0 1 252 61 144 SPQ93437.1 unnamed protein product [Plasmodiophora brassicae] diamond 504 114 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
25320739 25320739 PRJNA473201_P_NODE_25580_length_390_cov_1.214511_g24838_i0 PRJNA473201 25580 390 1.214511 4.7365929 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 170 1.05e-50   NR CEP01997.1 37360 g24838 i0 66.9 0.953846153846154 124 41 95.4 0 17 388 1 124 CEP01997.1 hypothetical protein PBRA_002262 [Plasmodiophora brassicae] diamond 372 170 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
26854921 26854921 PRJNA473201_P_NODE_82001_length_243_cov_0.905882_g81259_i0 PRJNA473201 82001 243 0.905882 2.20129326 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 63.2 2.34e-9   NR CEO97265.1 37360 g81259 i0 61 0.506172839506173 41 16 50.6 0 119 241 240 280 CEO97265.1 hypothetical protein PBRA_000608 [Plasmodiophora brassicae] diamond 123 63.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28244561 28244561 PRJNA473201_P_NODE_33546_length_342_cov_2.003717_g32804_i0 PRJNA473201 33546 342 2.003717 6.85271214 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 144 1.54e-41   NR CEO99081.1 37360 g32804 i0 66.7 1.67543859649123 96 32 84.2 0 3 290 47 142 CEO99081.1 hypothetical protein PBRA_007195 [Plasmodiophora brassicae] diamond 573 144 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28244572 28244572 PRJNA473201_P_NODE_7226_length_758_cov_2.366423_g6555_i0 PRJNA473201 7226 758 2.366423 17.93748634 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 147 8.58e-41   NR CEP01632.1 37360 g6555 i0 63.9 2.48548812664908 122 44 48.3 0 51 416 7 128 CEP01632.1 hypothetical protein PBRA_008575 [Plasmodiophora brassicae] diamond 1884 147 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28307976 28307976 PRJNA473201_P_NODE_79506_length_244_cov_0.900585_g78764_i0 PRJNA473201 79506 244 0.900585 2.1974274 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 88.6 3.76e-20   NR SPQ93437.1 37360 g78764 i0 58.4 2.84016393442623 77 32 94.7 0 8 238 61 137 SPQ93437.1 unnamed protein product [Plasmodiophora brassicae] diamond 693 88.6 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
28812734 28812734 PRJNA473201_P_NODE_33748_length_341_cov_2.854478_g33006_i0 PRJNA473201 33748 341 2.854478 9.73376998 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 146 9.599999999999999e-41   NR SPQ93792.1 37360 g33006 i0 67.3 1.87390029325513 107 34 94.1 1 321 1 157 262 SPQ93792.1 unnamed protein product [Plasmodiophora brassicae] diamond 639 146 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29823220 29823220 PRJNA473201_P_NODE_44591_length_305_cov_1.991379_g43849_i0 PRJNA473201 44591 305 1.991379 6.07370595 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 87 8.91e-19   NR CEP03344.1 37360 g43849 i0 70.2 0.560655737704918 57 17 56.1 0 304 134 136 192 CEP03344.1 hypothetical protein PBRA_003104 [Plasmodiophora brassicae] diamond 171 87 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
29839609 29839609 PRJNA473201_P_NODE_67971_length_250_cov_0.870056_g67229_i0 PRJNA473201 67971 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82.8 3.16e-16   NR CEO94374.1 37360 g67229 i0 67.7 5.88 62 13 66 1 248 84 757 818 CEO94374.1 hypothetical protein PBRA_000159 [Plasmodiophora brassicae] diamond 1470 82.8 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
30455666 30455666 PRJNA473201_P_NODE_32333_length_348_cov_1.418182_g31591_i0 PRJNA473201 32333 348 1.418182 4.93527336 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 154 1.51e-43   NR CEO97280.1 37360 g31591 i0 68.1 0.974137931034483 113 36 97.4 0 346 8 77 189 CEO97280.1 hypothetical protein PBRA_000625 [Plasmodiophora brassicae] diamond 339 154 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
31134673 31134673 PRJNA473201_P_NODE_28675_length_368_cov_2.081356_g27933_i0 PRJNA473201 28675 368 2.081356 7.65939008 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 8.5e-26   NR CAL69925.1 37360 g27933 i0 61.5 5.77989130434783 78 30 63.6 0 128 361 24 101 CAL69925.1 hypothetical protein [Plasmodiophora brassicae] diamond 2127 107 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32036016 32036016 PRJNA473201_P_NODE_53898_length_282_cov_1.473684_g53156_i0 PRJNA473201 53898 282 1.473684 4.15578888 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 120 5.579999999999999e-31   NR CEO96095.1 37360 g53156 i0 54.8 0.98936170212766 93 42 98.9 0 281 3 99 191 CEO96095.1 hypothetical protein PBRA_004785 [Plasmodiophora brassicae] diamond 279 120 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32352718 32352718 PRJNA473201_P_NODE_17599_length_474_cov_3.371571_g16857_i0 PRJNA473201 17599 474 3.371571 15.98124654 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 111 1.39e-28   NR CEP02593.1 37360 g16857 i0 59.8 0.582278481012658 92 37 58.2 0 447 172 11 102 CEP02593.1 hypothetical protein PBRA_002561 [Plasmodiophora brassicae] diamond 276 111 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
32590215 32590215 PRJNA473201_P_NODE_73419_length_247_cov_0.885057_g72677_i0 PRJNA473201 73419 247 0.885057 2.18609079 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 97.4 1.22e-22   NR CEP01656.1 37360 g72677 i0 58.3 2.02834008097166 84 31 99.6 2 246 1 53 134 CEP01656.1 hypothetical protein PBRA_008598 [Plasmodiophora brassicae] diamond 501 98.2 0.991853360488798 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;