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contig_metadata

4 rows where bioproject = "PRJNA473201", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 4 ✖

bioproject 1

  • PRJNA473201 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8748280 8748280 PRJNA473201_P_NODE_75367_length_246_cov_0.890173_g74625_i0 PRJNA473201 75367 246 0.890173 2.18982558 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.022   NTclustered gi|551611361|ref|XM_005786716.1| 280463 g74625 i0 100 0.227642276422764 28 0 11 0 214 241 1492 1465 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 56 52.8 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
27976713 27976713 PRJNA473201_P_NODE_74265_length_247_cov_0.885057_g73523_i0 PRJNA473201 74265 247 0.885057 2.18609079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 98.6 2.91e-22   NR KAJ1628902.1 483367 g73523 i0 63.2 9.76518218623482 76 28 92.3 0 11 238 244 319 KAJ1628902.1 hypothetical protein T492DRAFT_1014742 [Pavlovales sp. CCMP2436] diamond 2412 98.6 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
29633590 29633590 PRJNA473201_P_NODE_48070_length_296_cov_2.071749_g47328_i0 PRJNA473201 48070 296 2.071749 6.13237704 Prymnesium sp. 2812485 Haptophyta other_Eukaryota 78.6 2.26e-16   NR KAL3928833.1 2812485 g47328 i0 43.3 2.00675675675676 67 38 67.9 0 30 230 7 73 KAL3928833.1 MAG: hypothetical protein SGPRY_002222 [Prymnesium sp.] diamond 594 78.6 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium sp.
30282291 30282291 PRJNA473201_P_NODE_71212_length_248_cov_1.320000_g70470_i0 PRJNA473201 71212 248 1.32 3.2736 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 157 8.279999999999999e-48   NR XP_005762064.1 280463 g70470 i0 92.7 70.4274193548387 82 6 99.2 0 247 2 28 109 XP_005762064.1 hypothetical protein EMIHUDRAFT_414756 [Emiliania huxleyi CCMP1516] diamond 17466 157 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;