RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA473201", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA473201 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27645050 27645050 PRJNA473201_P_NODE_53624_length_283_cov_1.223810_g52882_i0 PRJNA473201 53624 283 1.22381 3.4633823 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0273   NR HEY6019966.1 2053589 g52882 i0 38.2 0.583038869257951 55 29 58.3 1 54 218 53 102 HEY6019966.1 class I SAM-dependent methyltransferase [Candidatus Paceibacterota bacterium] diamond 165 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30107672 30107672 PRJNA473201_P_NODE_29192_length_365_cov_2.095890_g28450_i0 PRJNA473201 29192 365 2.09589 7.6499985 Minisyncoccota bacterium 2053589 Bacteria Bacteria 68.9 9.1e-11   NR MCF7845245.1 2053589 g28450 i0 28.7 4.92328767123288 122 83 99.5 3 365 3 203 321 MCF7845245.1 serpin family protein [Candidatus Paceibacterota bacterium] diamond 1797 68.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;