RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where bioproject = "PRJNA473201" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 28 ✖

bioproject 1

  • PRJNA473201 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18295404 18295404 PRJNA473201_P_NODE_37875_length_324_cov_4.932271_g37133_i0 PRJNA473201 37875 324 4.932271 15.98055804 Patescibacteria group bacterium 2052139 Bacteria Bacteria 148 3.77e-31   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g37133 i0 82.54 51.7345679012346 189 13 52 12 11 179 426236 426424 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 16762 148 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
23396839 23396839 PRJNA473201_P_NODE_82919_length_242_cov_0.911243_g82177_i0 PRJNA473201 82919 242 0.911243 2.20520806 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 163 7.659999999999999e-45   NR MBC7498233.1 2044595 g82177 i0 100 1.98347107438017 80 0 99.2 0 3 242 95 174 MBC7498233.1 elongation factor G [Candidatus Altimarinota bacterium] diamond 480 163 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
24670590 24670590 PRJNA473201_P_NODE_73120_length_247_cov_1.327586_g72378_i0 PRJNA473201 73120 247 1.327586 3.27913742 Patescibacteria group bacterium 2052139 Bacteria Bacteria 230 9.61e-56   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g72378 i0 85.398 77.4453441295547 226 27 90 6 24 246 427949 427727 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 19129 230 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26632999 26632999 PRJNA473201_P_NODE_36121_length_331_cov_2.058140_g35379_i0 PRJNA473201 36121 331 2.05814 6.8124434 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 52.4 4.05e-5   NR MBW7954290.1 2044595 g35379 i0 31.7 1.08761329305136 120 63 97 4 3 323 171 284 MBW7954290.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 360 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26727568 26727568 PRJNA473201_P_NODE_65661_length_251_cov_1.657303_g64919_i0 PRJNA473201 65661 251 1.657303 4.15983053 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 96.3 5.26e-21   NR MBX9809433.1 2044595 g64919 i0 90.6 0.633466135458167 53 5 63.3 0 205 47 324 376 MBX9809433.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 159 96.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26854912 26854912 PRJNA473201_P_NODE_50661_length_290_cov_1.589862_g49919_i0 PRJNA473201 50661 290 1.589862 4.6105998 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 135 1.74e-34   NR MBC7498268.1 2044595 g49919 i0 81.3 0.993103448275862 96 18 99.3 0 3 290 662 757 MBC7498268.1 S-layer homology domain-containing protein [Candidatus Altimarinota bacterium] diamond 288 135 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26886509 26886509 PRJNA473201_P_NODE_12441_length_570_cov_2.678068_g11704_i0 PRJNA473201 12441 570 2.678068 15.2649876 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 280 6.899999999999998e-93   NR MBX9809765.1 2044595 g11704 i0 82.9 0.984210526315789 187 30 97.9 2 13 570 12 197 MBX9809765.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 561 280 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27455578 27455578 PRJNA473201_P_NODE_13143_length_553_cov_3.768750_g12404_i0 PRJNA473201 13143 553 3.76875 20.8411875 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 58.9 1.31e-6   NR NUJ98053.1 2044595 g12404 i0 47.1 0.461121157323689 85 42 44.5 2 297 542 236 320 NUJ98053.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 255 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27455593 27455593 PRJNA473201_P_NODE_79023_length_244_cov_0.900585_g78281_i0 PRJNA473201 79023 244 0.900585 2.1974274 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 67.8 8.74e-13   NR MBX9809872.1 2044595 g78281 i0 54.8 0.897540983606557 73 32 89.8 1 228 10 1 72 MBX9809872.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 219 67.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27645050 27645050 PRJNA473201_P_NODE_53624_length_283_cov_1.223810_g52882_i0 PRJNA473201 53624 283 1.22381 3.4633823 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0273   NR HEY6019966.1 2053589 g52882 i0 38.2 0.583038869257951 55 29 58.3 1 54 218 53 102 HEY6019966.1 class I SAM-dependent methyltransferase [Candidatus Paceibacterota bacterium] diamond 165 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27676657 27676657 PRJNA473201_P_NODE_24264_length_400_cov_0.941896_g23522_i0 PRJNA473201 24264 400 0.941896 3.767584 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 148 2.73e-41   NR MBX9809963.1 2044595 g23522 i0 71.7 0.69 92 26 69 0 397 122 61 152 MBX9809963.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 276 148 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27739899 27739899 PRJNA473201_P_NODE_32604_length_347_cov_1.036496_g31862_i0 PRJNA473201 32604 347 1.036496 3.59664112 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 129 5.04e-32   NR MBX9808915.1 2044595 g31862 i0 97.1 0.605187319884726 70 2 60.5 0 346 137 555 624 MBX9808915.1 molecular chaperone DnaK [Candidatus Altimarinota bacterium] diamond 210 129 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27960566 27960566 PRJNA473201_P_NODE_77285_length_245_cov_0.895349_g76543_i0 PRJNA473201 77285 245 0.895349 2.19360505 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 144 2.9099999999999998e-40   NR MBX9809962.1 2044595 g76543 i0 94.6 0.906122448979592 74 4 90.6 0 231 10 38 111 MBX9809962.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 222 144 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28339484 28339484 PRJNA473201_P_NODE_66426_length_251_cov_0.865169_g65684_i0 PRJNA473201 66426 251 0.865169 2.17157419 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 48.9 2.02e-4   NR MFC2105170.1 2306012 g65684 i0 31.9 1.08764940239044 91 39 89.6 3 242 18 66 149 MFC2105170.1 DUF3159 domain-containing protein [Candidatus Bipolaricaulota bacterium] diamond 273 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
29097349 29097349 PRJNA473201_P_NODE_76428_length_246_cov_0.890173_g75686_i0 PRJNA473201 76428 246 0.890173 2.18982558 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 150 1.28e-42   NR MBX9808977.1 2044595 g75686 i0 95.1 1 82 4 100 0 246 1 126 207 MBX9808977.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Candidatus Altimarinota bacterium] diamond 246 150 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29349909 29349909 PRJNA473201_P_NODE_36709_length_329_cov_1.203125_g35967_i0 PRJNA473201 36709 329 1.203125 3.95828125 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 147 1.46e-38   NR MBX9808866.1 2044595 g35967 i0 78.7 0.857142857142857 94 20 85.7 0 2 283 844 937 MBX9808866.1 DUF11 domain-containing protein [Candidatus Altimarinota bacterium] diamond 282 147 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29381412 29381412 PRJNA473201_P_NODE_50769_length_290_cov_1.244240_g50027_i0 PRJNA473201 50769 290 1.24424 3.608296 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 65.5 6.55e-10   NR NRH20551.1 2044595 g50027 i0 44 0.775862068965517 75 42 77.6 0 227 3 233 307 NRH20551.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 225 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29696740 29696740 PRJNA473201_P_NODE_17870_length_470_cov_1.823678_g17128_i0 PRJNA473201 17870 470 1.823678 8.5712866 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 96.7 6.28e-20   NR MBX9809764.1 2044595 g17128 i0 82.7 0.331914893617021 52 9 33.2 0 466 311 362 413 MBX9809764.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 156 96.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29855103 29855103 PRJNA473201_P_NODE_58111_length_271_cov_1.555556_g57369_i0 PRJNA473201 58111 271 1.555556 4.21555676 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 78.6 1.22e-14   NR MBX9809027.1 2044595 g57369 i0 83.7 0.542435424354244 49 8 54.2 0 149 3 125 173 MBX9809027.1 ribonuclease Y [Candidatus Altimarinota bacterium] diamond 147 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30013116 30013116 PRJNA473201_P_NODE_72071_length_248_cov_0.880000_g71329_i0 PRJNA473201 72071 248 0.88 2.1824 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 52 1.43e-5   NR MBX9831266.1 2803731 g71329 i0 37.8 0.991935483870968 82 47 95.6 2 239 3 70 150 MBX9831266.1 ankyrin repeat domain-containing protein [Candidatus Babeliales bacterium] diamond 246 52 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
30107672 30107672 PRJNA473201_P_NODE_29192_length_365_cov_2.095890_g28450_i0 PRJNA473201 29192 365 2.09589 7.6499985 Minisyncoccota bacterium 2053589 Bacteria Bacteria 68.9 9.1e-11   NR MCF7845245.1 2053589 g28450 i0 28.7 4.92328767123288 122 83 99.5 3 365 3 203 321 MCF7845245.1 serpin family protein [Candidatus Paceibacterota bacterium] diamond 1797 68.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30771437 30771437 PRJNA473201_P_NODE_38494_length_322_cov_1.236948_g37752_i0 PRJNA473201 38494 322 1.236948 3.98297256 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 185 2.09e-56   NR MBX9809964.1 2044595 g37752 i0 85.4 0.959627329192547 103 15 96 0 314 6 142 244 MBX9809964.1 NAD(+) synthase [Candidatus Altimarinota bacterium] diamond 309 185 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31751193 31751193 PRJNA473201_P_NODE_68177_length_250_cov_0.870056_g67435_i0 PRJNA473201 68177 250 0.870056 2.17514 Patescibacteria group bacterium 2052139 Bacteria Bacteria 60.8 1.98e-10   NR MBU0976447.1 2052139 g67435 i0 64.9 2.832 37 13 44.4 0 240 130 1 37 MBU0976447.1 50S ribosomal protein L36 [Patescibacteria group bacterium] diamond 708 60.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31751201 31751201 PRJNA473201_P_NODE_85277_length_241_cov_0.916667_g84535_i0 PRJNA473201 85277 241 0.916667 2.20916747 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 77.8 1.51e-16   NR MBX9808990.1 2044595 g84535 i0 95 0.49792531120332 40 1 49.8 1 121 2 1 39 MBX9808990.1 30S ribosomal protein S18 [Candidatus Altimarinota bacterium] diamond 120 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32289567 32289567 PRJNA473201_P_NODE_37679_length_325_cov_1.527778_g36937_i0 PRJNA473201 37679 325 1.527778 4.9652785 Patescibacteria group bacterium 2052139 Bacteria Bacteria 114 6.690000000000001e-27   NR MDQ5968666.1 2052139 g36937 i0 61.1 0.996923076923077 108 39 99.7 1 325 2 155 259 MDQ5968666.1 hypothetical protein [Patescibacteria group bacterium] diamond 324 114 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32510998 32510998 PRJNA473201_P_NODE_67039_length_251_cov_0.865169_g66297_i0 PRJNA473201 67039 251 0.865169 2.17157419 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 131 1.37e-33   NR MBX9809267.1 2044595 g66297 i0 78.3 0.99203187250996006 83 18 99.2 0 250 2 182 264 MBX9809267.1 ATP-binding cassette domain-containing protein [Candidatus Altimarinota bacterium] diamond 249 131 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32511005 32511005 PRJNA473201_P_NODE_83059_length_242_cov_0.911243_g82317_i0 PRJNA473201 83059 242 0.911243 2.20520806 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 99.8 9.95e-23   NR MBX9809783.1 2044595 g82317 i0 83.8 0.84297520661157 68 10 84.3 1 242 39 6 72 MBX9809783.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 204 99.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32825824 32825824 PRJNA473201_P_NODE_17880_length_470_cov_1.551637_g17138_i0 PRJNA473201 17880 470 1.551637 7.2926939 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 69.3 1.98e-12   NR MCD6142244.1 2306012 g17138 i0 69 1.10425531914894 42 13 26.8 0 466 341 25 66 MCD6142244.1 cold-shock protein [Candidatus Bipolaricaulota bacterium] diamond 519 69.3 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;