RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA459724", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

  • Bacillati · 6 ✖

bioproject 1

  • PRJNA459724 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10646926 10646926 PRJNA459724_S_NODE_2749_length_155_cov_4.391667_g2746_i0 PRJNA459724 2749 155 4.391667 6.80708385 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 52.8 0.013   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g2746 i0 100 0.180645161290323 28 0 18 0 97 124 6413125 6413152 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
27392376 27392376 PRJNA459724_P_NODE_5443_length_165_cov_2.036765_g5051_i0 PRJNA459724 5443 165 2.036765 3.36066225 Anaerolineales bacterium 2073117 Bacteria Bacteria 65.5 1.05e-10   NR MCZ2127442.1 2073117 g5051 i0 66.7 0.981818181818182 54 18 98.2 0 164 3 49 102 MCZ2127442.1 hypothetical protein [Anaerolineales bacterium] diamond 162 65.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29129028 29129028 PRJNA459724_P_NODE_5409_length_166_cov_1.941606_g5017_i0 PRJNA459724 5409 166 1.941606 3.22306596 Candidatus Villigracilis vicinus 3140679 Bacteria Bacteria 90.1 4.13e-21   NR MBK7450702.1 3140679 g5017 i0 96.4 0.993975903614458 55 2 99.4 0 2 166 74 128 MBK7450702.1 hypothetical protein [Candidatus Villigracilis vicinus] diamond 165 90.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Candidatus Villigracilaceae Candidatus Villigracilis Candidatus Villigracilis vicinus
30013094 30013094 PRJNA459724_P_NODE_2871_length_288_cov_1.907336_g2480_i0 PRJNA459724 2871 288 1.907336 5.49312768 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 174 1.5699999999999996e-52   NR HRS75265.1 2024896 g2480 i0 97.8 0.927083333333333 89 2 92.7 0 2 268 129 217 HRS75265.1 hypothetical protein [Anaerolineaceae bacterium] diamond 267 174 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
30234134 30234134 PRJNA459724_P_NODE_5332_length_169_cov_1.721429_g4940_i0 PRJNA459724 5332 169 1.721429 2.90921501 Candidatus Villigracilis vicinus 3140679 Bacteria Bacteria 98.2 1.97e-24   NR MBK7450710.1 3140679 g4940 i0 85.5 1.95266272189349 55 8 97.6 0 3 167 92 146 MBK7450710.1 hypothetical protein [Candidatus Villigracilis vicinus] diamond 330 98.2 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Candidatus Villigracilaceae Candidatus Villigracilis Candidatus Villigracilis vicinus
32384051 32384051 PRJNA459724_P_NODE_5079_length_176_cov_2.884354_g4687_i0 PRJNA459724 5079 176 2.884354 5.07646304 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 123 2.12e-33   NR HRS75265.1 2024896 g4687 i0 100 0.988636363636364 58 0 98.9 0 175 2 66 123 HRS75265.1 hypothetical protein [Anaerolineaceae bacterium] diamond 174 123 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;