RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA459724", tax_clade = "Opisthokonta" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA459724 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11921800 11921800 PRJNA459724_S_NODE_2610_length_157_cov_3.704918_g2607_i0 PRJNA459724 2610 157 3.704918 5.81672126 Lingula anatina 7574 Brachiopoda other_Eukaryota 63.2 5.44e-10   NR XP_013390049.1 7574 g2607 i0 67.6 1.62420382165605 37 12 70.7 0 15 125 251 287 XP_013390049.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X2 [Lingula anatina] diamond 255 63.2 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27455571 27455571 PRJNA459724_S_NODE_1443_length_183_cov_2.432432_g1440_i0 PRJNA459724 1443 183 2.432432 4.45135056 Lingula anatina 7574 Brachiopoda other_Eukaryota 54.7 1.03e-6   NR XP_013396630.1 7574 g1440 i0 60.5 0.704918032786885 43 17 70.5 0 171 43 462 504 XP_013396630.1 equilibrative nucleoside transporter 3 [Lingula anatina] diamond 129 54.7 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;