RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA459724", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA459724 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28023790 28023790 PRJNA459724_P_NODE_3745_length_229_cov_1.750000_g3353_i0 PRJNA459724 3745 229 1.75 4.0075 Minisyncoccota bacterium 2053589 Bacteria Bacteria 128 3.77e-34   NR MEO5646131.1 2053589 g3353 i0 75 0.995633187772926 76 19 99.6 0 2 229 57 132 MEO5646131.1 Mu-like prophage major head subunit gpT family protein [Candidatus Paceibacterota bacterium] diamond 228 128 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28402593 28402593 PRJNA459724_P_NODE_446_length_870_cov_2.780024_g251_i1 PRJNA459724 446 870 2.780024 24.1862088 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.4 3.41e-20   NR HOV89053.1 2053589 g251 i1 76.4 0.189655172413793 55 13 19 0 200 36 61 115 HOV89053.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 94.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28687033 28687033 PRJNA459724_P_NODE_5167_length_174_cov_1.675862_g4775_i0 PRJNA459724 5167 174 1.675862 2.91599988 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.4 1.67e-9   NR MFA6295530.1 2053589 g4775 i0 67.9 0.96551724137931 56 18 96.6 0 169 2 68 123 MFA6295530.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 168 62.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31561701 31561701 PRJNA459724_P_NODE_396_length_910_cov_2.771850_g251_i0 PRJNA459724 396 910 2.77185 25.223835 Minisyncoccota bacterium 2053589 Bacteria Bacteria 94.4 4.36e-20   NR HOV89053.1 2053589 g251 i0 76.4 0.181318681318681 55 13 18.1 0 200 36 61 115 HOV89053.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 94.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;