contig_metadata
12 rows where bioproject = "PRJNA454503", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2368977 | 2368977 | PRJNA454503_P_NODE_23202_length_256_cov_1.358974_g22873_i0 | PRJNA454503 | 23202 | 256 | 1.358974 | 3.47897344 | Bdellovibrio | 958 | Bacteria | Bacteria | 372 | 1.57e-98 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g22873 | i0 | 92.941 | 221.74609375 | 255 | 18 | 99 | 0 | 2 | 256 | 611390 | 611136 | Bdellovibrio bacteriovorus W, complete genome | blastn | 56767 | 372 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 28212886 | 28212886 | PRJNA454503_P_NODE_83506_length_202_cov_1.843972_g83177_i0 | PRJNA454503 | 83506 | 202 | 1.843972 | 3.72482344 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 68.2 | 2.34e-11 | NR | MCB0346654.1 | 2053517 | g83177 | i0 | 51.5 | 3.92079207920792 | 66 | 31 | 98 | 1 | 2 | 199 | 417 | 481 | MCB0346654.1 PhoH family protein [Bdellovibrionales bacterium] | diamond | 792 | 68.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 29492254 | 29492254 | PRJNA454503_P_NODE_44230_length_222_cov_1.248447_g43901_i0 | PRJNA454503 | 44230 | 222 | 1.248447 | 2.77155234 | Bacteriovorax | 146784 | Bacteria | Bacteria | 117 | 1.55e-28 | NR | WP_102241963.1 | 960 | g43901 | i0 | 65.8 | 3.94594594594595 | 73 | 25 | 98.6 | 0 | 219 | 1 | 496 | 568 | WP_102241963.1 ABC transporter substrate-binding protein [Bacteriovorax stolpii] | diamond | 876 | 117 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 29949823 | 29949823 | PRJNA454503_P_NODE_35011_length_233_cov_1.348837_g34682_i0 | PRJNA454503 | 35011 | 233 | 1.348837 | 3.14279021 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 90.5 | 5.01e-19 | NR | MES2963473.1 | 3034175 | g34682 | i0 | 61.3 | 1.90557939914163 | 75 | 29 | 96.6 | 0 | 226 | 2 | 412 | 486 | MES2963473.1 hypothetical protein [Bdellovibrionota bacterium] | diamond | 444 | 90.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 30076034 | 30076034 | PRJNA454503_P_NODE_68792_length_207_cov_0.890411_g68463_i0 | PRJNA454503 | 68792 | 207 | 0.890411 | 1.84315077 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 92.8 | 1.33e-20 | NR | MCM2351647.1 | 2081706 | g68463 | i0 | 71 | 1 | 69 | 19 | 100 | 1 | 207 | 1 | 86 | 153 | MCM2351647.1 FHA domain-containing protein [Bacteriovoracaceae bacterium] | diamond | 207 | 92.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 30644694 | 30644694 | PRJNA454503_P_NODE_52273_length_213_cov_1.710526_g51944_i0 | PRJNA454503 | 52273 | 213 | 1.710526 | 3.64342038 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 85.1 | 2.72e-17 | NR | MES2963570.1 | 3034175 | g51944 | i0 | 58.1 | 1.74647887323944 | 62 | 26 | 87.3 | 0 | 187 | 2 | 3 | 64 | MES2963570.1 AmpG family muropeptide MFS transporter [Bdellovibrionota bacterium] | diamond | 372 | 85.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 31403522 | 31403522 | PRJNA454503_P_NODE_36036_length_231_cov_2.852941_g35707_i0 | PRJNA454503 | 36036 | 231 | 2.852941 | 6.59029371 | Halobacteriovoraceae bacterium | 2026745 | Bacteria | Bacteria | 99.4 | 3.92e-22 | NR | MAX66883.1 | 2026745 | g35707 | i0 | 59.7 | 1 | 77 | 31 | 100 | 0 | 1 | 231 | 185 | 261 | MAX66883.1 hypothetical protein [Halobacteriovoraceae bacterium] | diamond | 231 | 99.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovoraceae bacterium | |||
| 32035994 | 32035994 | PRJNA454503_P_NODE_73398_length_205_cov_1.805556_g73069_i0 | PRJNA454503 | 73398 | 205 | 1.805556 | 3.7013898 | Bacteriovorax sp. | 2608087 | Bacteria | Bacteria | 83.2 | 3.63e-17 | NR | MBC7427325.1 | 2608087 | g73069 | i0 | 63.9 | 0.892682926829268 | 61 | 22 | 89.3 | 0 | 204 | 22 | 188 | 248 | MBC7427325.1 zinc ABC transporter substrate-binding protein [Bacteriovorax sp.] | diamond | 183 | 83.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. | ||
| 32415842 | 32415842 | PRJNA454503_P_NODE_52279_length_213_cov_1.710526_g51950_i0 | PRJNA454503 | 52279 | 213 | 1.710526 | 3.64342038 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 124 | 4.85e-31 | NR | PZP55148.1 | 349221 | g51950 | i0 | 98.6 | 0.985915492957746 | 70 | 1 | 98.6 | 0 | 211 | 2 | 990 | 1059 | PZP55148.1 MAG: CusA/CzcA family heavy metal efflux RND transporter [Micavibrio aeruginosavorus] | diamond | 210 | 124 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 32432014 | 32432014 | PRJNA454503_P_NODE_34019_length_234_cov_1.502890_g33690_i0 | PRJNA454503 | 34019 | 234 | 1.50289 | 3.5167626 | Bdellovibrio | 958 | Bacteria | Bacteria | 102 | 1.29e-23 | NR | WP_176400962.1 | 1732569 | g33690 | i0 | 67.1 | 3.87179487179487 | 76 | 25 | 97.4 | 0 | 6 | 233 | 78 | 153 | WP_176400962.1 alpha/beta hydrolase fold domain-containing protein [Bdellovibrio sp. SKB1291214] | diamond | 906 | 102 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. SKB1291214 | ||
| 32699702 | 32699702 | PRJNA454503_P_NODE_56280_length_211_cov_0.866667_g55951_i0 | PRJNA454503 | 56280 | 211 | 0.866667 | 1.82866737 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 107 | 5.43e-25 | NR | MBA2403248.1 | 2053517 | g55951 | i0 | 73.9 | 0.981042654028436 | 69 | 18 | 98.1 | 0 | 209 | 3 | 518 | 586 | MBA2403248.1 enoyl-CoA hydratase/isomerase family protein [Bdellovibrionales bacterium] | diamond | 207 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32794048 | 32794048 | PRJNA454503_P_NODE_63800_length_208_cov_1.727891_g63471_i0 | PRJNA454503 | 63800 | 208 | 1.727891 | 3.59401328 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 139 | 1.4399999999999998e-37 | NR | PZP55973.1 | 349221 | g63471 | i0 | 98.6 | 0.995192307692308 | 69 | 1 | 99.5 | 0 | 207 | 1 | 286 | 354 | PZP55973.1 MAG: argininosuccinate synthase [Micavibrio aeruginosavorus] | diamond | 207 | 139 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;