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contig_metadata

32 rows where bioproject = "PRJNA454503", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 32 ✖

tax_kingdom 1

  • Pseudomonadati · 32 ✖

bioproject 1

  • PRJNA454503 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
442851 442851 PRJNA454503_P_NODE_75021_length_205_cov_0.902778_g74692_i0 PRJNA454503 75021 205 0.902778 1.8506949 Bacteria 2 Bacteria Bacteria 108 2.89e-28   NR MCA1592784.1 1978231 g74692 i0 72.1 4.97560975609756 68 19 99.5 0 205 2 66 133 MCA1592784.1 PA2169 family four-helix-bundle protein [Acidobacteriota bacterium] diamond 1020 108 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
4269253 4269253 PRJNA454503_P_NODE_24764_length_251_cov_0.915789_g24435_i0 PRJNA454503 24764 251 0.915789 2.29863039 Alloacidobacterium dinghuense 2763107 Bacteria Bacteria 374 4.27e-99   NTclustered gi|1895675831|gb|CP060394.1| 2763107 g24435 i0 96.476 180.302788844622 227 6 90 2 25 251 4008094 4007870 Alloacidobacterium dinghuense strain 4Y35 chromosome, complete genome blastn 45256 374 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Alloacidobacterium Alloacidobacterium dinghuense
5545923 5545923 PRJNA454503_P_NODE_26945_length_244_cov_1.420765_g26616_i0 PRJNA454503 26945 244 1.420765 3.4666666 Terriglobus roseus 392734 Bacteria Bacteria 361 3.219999999999999e-95   NTclustered gi|390410848|gb|CP003379.1| 926566 g26616 i0 93.443 132.30737704918 244 15 99 1 1 243 926977 927220 Terriglobus roseus DSM 18391, complete genome blastn 32283 361 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terriglobus Terriglobus roseus
6820243 6820243 PRJNA454503_P_NODE_5186_length_506_cov_1.229213_g4861_i0 PRJNA454503 5186 506 1.2292129999999999 6.21981778 Acidobacteriaceae bacterium ZG23-2 2883246 Bacteria Bacteria 647 0   NTclustered gi|2221425918|gb|CP085323.1| 2883246 g4861 i0 89.784 103.837944664032 509 46 100 4 1 506 1429455 1429960 Acidobacteriaceae bacterium ZG23-2 chromosome, complete genome blastn 52542 647 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium ZG23-2
9370768 9370768 PRJNA454503_P_NODE_85948_length_202_cov_0.921986_g85619_i0 PRJNA454503 85948 202 0.921986 1.86241172 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 156 1.3e-33   NTclustered gi|2874254091|emb|OY970174.1| 171953 g85619 i0 82.955 20.5792079207921 176 27 86 3 1 174 2484317 2484491 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 4157 156 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
10646367 10646367 PRJNA454503_P_NODE_46349_length_219_cov_2.056962_g46020_i0 PRJNA454503 46349 219 2.056962 4.50474678 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 339 1.33e-88   NTclustered gi|2621707050|emb|OY764903.1| 2212468 g46020 i0 94.521 174.063926940639 219 12 100 0 1 219 3556471 3556689 MAG: Bryobacteraceae bacterium isolate d7944118-f527-4ba8-a886-cdd3ae4bc3f8 genome assembly, chromosome: 1 blastn 38120 339 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
15745496 15745496 PRJNA454503_P_NODE_75853_length_205_cov_0.902778_g75524_i0 PRJNA454503 75853 205 0.902778 1.8506949 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 134 2e-35   NR HEY7286126.1 2910147 g75524 i0 95.6 16.9170731707317 68 3 99.5 0 1 204 208 275 HEY7286126.1 proline--tRNA ligase [Vicinamibacterales bacterium] diamond 3468 134 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
16396370 16396370 PRJNA454503_P_NODE_60253_length_209_cov_1.756757_g59924_i0 PRJNA454503 60253 209 1.756757 3.67162213 Acidobacterium 33973 Bacteria Bacteria 379 7.4e-101   NTclustered gi|470484216|ref|NR_076636.1| 33075 g59924 i0 99.519 113.038277511962 208 1 99 0 1 208 2649 2856 Acidobacterium capsulatum strain 161 23S ribosomal RNA gene, complete sequence blastn 23625 379 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidobacterium Acidobacterium capsulatum
20844481 20844481 PRJNA454503_P_NODE_72677_length_206_cov_0.896552_g72348_i0 PRJNA454503 72677 206 0.896552 1.84689712 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 368 1.57e-97   NTclustered gi|2874254159|emb|OY970389.1| 2283092 g72348 i0 99.024 155.946601941748 205 2 99 0 2 206 2617014 2617218 MAG: Pyrinomonadaceae bacterium isolate MFD09206.bin.c.1 genome assembly, chromosome: 1 blastn 32125 368 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
22119189 22119189 PRJNA454503_P_NODE_58898_length_210_cov_0.872483_g58569_i0 PRJNA454503 58898 210 0.872483 1.8322143 Bacteria 2 Bacteria Bacteria 119 2.76e-29   NR MBP7778952.1 1978231 g58569 i0 82.9 3 70 12 100 0 210 1 375 444 MBP7778952.1 PD40 domain-containing protein [Acidobacteriota bacterium] diamond 630 119 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24668591 24668591 PRJNA454503_P_NODE_41420_length_225_cov_1.585366_g41091_i0 PRJNA454503 41420 225 1.585366 3.5670735 Blastocatellia bacterium 2052146 Bacteria Bacteria 73.9 3.01e-13   NR MDX6613397.1 2052146 g41091 i0 49.3 0.946666666666667 71 36 94.7 0 223 11 1793 1863 MDX6613397.1 hypothetical protein [Blastocatellia bacterium] diamond 213 73.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
26696181 26696181 PRJNA454503_P_NODE_42241_length_224_cov_1.595092_g41912_i0 PRJNA454503 42241 224 1.595092 3.57300608 Acidobacteriota bacterium 1978231 Bacteria Bacteria 139 1.92e-36   NR MBA2258533.1 1978231 g41912 i0 91.9 0.991071428571429 74 6 99.1 0 3 224 377 450 MBA2258533.1 TonB-dependent receptor [Acidobacteriota bacterium] diamond 222 139 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26886489 26886489 PRJNA454503_P_NODE_34021_length_234_cov_1.502890_g33692_i0 PRJNA454503 34021 234 1.50289 3.5167626 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 125 2.5599999999999997e-31   NR HZJ33401.1 2910147 g33692 i0 90.9 0.987179487179487 77 7 98.7 0 2 232 288 364 HZJ33401.1 efflux RND transporter permease subunit [Vicinamibacterales bacterium] diamond 231 125 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27012808 27012808 PRJNA454503_P_NODE_71222_length_206_cov_0.896552_g70893_i0 PRJNA454503 71222 206 0.896552 1.84689712 Bryobacterales bacterium 2026791 Bacteria Bacteria 117 3.04e-29   NR MBL8234448.1 2026791 g70893 i0 88.2 0.990291262135922 68 8 99 0 3 206 269 336 MBL8234448.1 outer membrane protein assembly factor BamD [Bryobacterales bacterium] diamond 204 117 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27645023 27645023 PRJNA454503_P_NODE_39624_length_227_cov_1.566265_g39295_i0 PRJNA454503 39624 227 1.566265 3.55542155 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 126 2.38e-34   NR MEQ1729607.1 2910147 g39295 i0 78.6 2.82819383259912 70 15 92.5 0 226 17 149 218 MEQ1729607.1 thioredoxin family protein [Vicinamibacterales bacterium] diamond 642 126 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27739879 27739879 PRJNA454503_P_NODE_46664_length_219_cov_1.645570_g46335_i0 PRJNA454503 46664 219 1.64557 3.6037983 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 93.2 5.47e-22   NR MEQ1727732.1 2910147 g46335 i0 78.9 0.780821917808219 57 12 78.1 0 48 218 1 57 MEQ1727732.1 nuclear transport factor 2 family protein [Vicinamibacterales bacterium] diamond 171 93.2 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
27913422 27913422 PRJNA454503_P_NODE_85285_length_202_cov_0.921986_g84956_i0 PRJNA454503 85285 202 0.921986 1.86241172 Acidobacteriota 57723 Bacteria Bacteria 72 1.03e-12   NR HJZ68313.1 2052146 g84956 i0 58.3 5.3019801980198 60 24 89.1 1 201 22 187 245 HJZ68313.1 Si-specific NAD(P)(+) transhydrogenase [Blastocatellia bacterium] diamond 1071 72 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28434221 28434221 PRJNA454503_P_NODE_63166_length_208_cov_2.646259_g62837_i0 PRJNA454503 63166 208 2.646259 5.50421872 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 136 1.25e-36   NR HYR71426.1 3069120 g62837 i0 97.1 0.995192307692308 69 2 99.5 0 1 207 13 81 HYR71426.1 beta-ketoacyl-[acyl-carrier-protein] synthase family protein [Candidatus Acidiferrum sp.] diamond 207 136 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
29160636 29160636 PRJNA454503_P_NODE_69589_length_207_cov_0.890411_g69260_i0 PRJNA454503 69589 207 0.890411 1.84315077 Acidipila sp. EB88 2305226 Bacteria Bacteria 127 5.04e-32   NR WP_124846881.1 2305226 g69260 i0 89.6 0.971014492753623 67 7 97.1 0 2 202 564 630 WP_124846881.1 HD domain-containing protein [Acidipila sp. EB88] diamond 201 127 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Acidipila Acidipila sp. EB88
29349893 29349893 PRJNA454503_P_NODE_84389_length_202_cov_0.921986_g84060_i0 PRJNA454503 84389 202 0.921986 1.86241172 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 65.5 2.08e-10   NR HVR96387.1 2651171 g84060 i0 45.9 4.67821782178218 61 33 90.6 0 196 14 154 214 HVR96387.1 alkaline phosphatase D family protein [Thermoanaerobaculia bacterium] diamond 945 65.5 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29507608 29507608 PRJNA454503_P_NODE_81710_length_203_cov_0.915493_g81381_i0 PRJNA454503 81710 203 0.915493 1.85845079 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 41.2 0.0485   NR HEX6650196.1 2283092 g81381 i0 36.7 0.886699507389163 60 33 84.2 2 188 18 23 80 HEX6650196.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 180 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30266009 30266009 PRJNA454503_P_NODE_37352_length_230_cov_1.449704_g37023_i0 PRJNA454503 37352 230 1.449704 3.3343192 Candidatus Sulfomarinibacter kjeldsenii 2885994 Bacteria Bacteria 79 5.52e-15   NR MBD3858075.1 2885994 g37023 i0 45.5 2.94782608695652 77 37 93.9 1 218 3 156 232 MBD3858075.1 S9 family peptidase [Candidatus Sulfomarinibacter kjeldsenii] diamond 678 79 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Candidatus Sulfomarinibacteraceae Candidatus Sulfomarinibacter Candidatus Sulfomarinibacter kjeldsenii
30314050 30314050 PRJNA454503_P_NODE_84012_length_202_cov_1.539007_g83683_i0 PRJNA454503 84012 202 1.539007 3.10879414 Bacteria 2 Bacteria Bacteria 77 1.86e-15   NR OLB29339.1 1803466 g83683 i0 66.7 2.40594059405941 54 18 80.2 0 12 173 107 160 OLB29339.1 MAG: hypothetical protein AUH13_15995 [Acidobacteria bacterium 13_2_20CM_58_27] diamond 486 77 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium 13_2_20CM_58_27
30455640 30455640 PRJNA454503_P_NODE_47293_length_218_cov_2.070064_g46964_i0 PRJNA454503 47293 218 2.070064 4.51273952 Acidobacteriota bacterium 1978231 Bacteria Bacteria 129 2.6099999999999993e-34   NR MDQ3712899.1 1978231 g46964 i0 84.5 1.95412844036697 71 11 97.7 0 214 2 76 146 MDQ3712899.1 decarboxylating 6-phosphogluconate dehydrogenase [Acidobacteriota bacterium] diamond 426 129 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30613142 30613142 PRJNA454503_P_NODE_79693_length_204_cov_0.909091_g79364_i0 PRJNA454503 79693 204 0.909091 1.85454564 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 140 4.89e-38   NR HZB26640.1 2910147 g79364 i0 92.2 3.76470588235294 64 5 94.1 0 202 11 342 405 HZB26640.1 tetratricopeptide repeat protein [Vicinamibacterales bacterium] diamond 768 140 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31181670 31181670 PRJNA454503_P_NODE_68515_length_207_cov_0.890411_g68186_i0 PRJNA454503 68515 207 0.890411 1.84315077 Bryobacterales bacterium 2026791 Bacteria Bacteria 91.7 1.33e-19   NR MDE0292614.1 2026791 g68186 i0 55.9 1.97101449275362 68 30 98.6 0 205 2 362 429 MDE0292614.1 carboxypeptidase regulatory-like domain-containing protein [Bryobacterales bacterium] diamond 408 91.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
31213157 31213157 PRJNA454503_P_NODE_44635_length_221_cov_1.925000_g44306_i0 PRJNA454503 44635 221 1.925 4.25425 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 104 1.94e-24   NR HKF65714.1 2910147 g44306 i0 71.4 0.855203619909502 63 18 85.5 0 208 20 14 76 HKF65714.1 alpha/beta fold hydrolase [Vicinamibacterales bacterium] diamond 189 104 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
31245158 31245158 PRJNA454503_P_NODE_78555_length_204_cov_0.909091_g78226_i0 PRJNA454503 78555 204 0.909091 1.85454564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 132 7.47e-36   NR MBA2603732.1 1978231 g78226 i0 92.5 1.97058823529412 67 5 98.5 0 2 202 213 279 MBA2603732.1 UTP--glucose-1-phosphate uridylyltransferase GalU [Acidobacteriota bacterium] diamond 402 132 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32067554 32067554 PRJNA454503_P_NODE_52758_length_212_cov_2.569536_g52429_i0 PRJNA454503 52758 212 2.569536 5.44741632 Acidobacteriota bacterium 1978231 Bacteria Bacteria 127 3.2400000000000004e-33   NR MEO8257381.1 1978231 g52429 i0 84.3 2.97169811320755 70 11 99.1 0 2 211 219 288 MEO8257381.1 alanine--glyoxylate aminotransferase family protein [Acidobacteriota bacterium] diamond 630 127 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32131138 32131138 PRJNA454503_P_NODE_89778_length_190_cov_2.015504_g89449_i0 PRJNA454503 89778 190 2.015504 3.8294576 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 98.6 1.6299999999999994e-23   NR HZI78424.1 2910147 g89449 i0 98.1 0.852631578947368 54 1 85.3 0 188 27 186 239 HZI78424.1 orotidine-5'-phosphate decarboxylase [Vicinamibacterales bacterium] diamond 162 98.6 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32684320 32684320 PRJNA454503_P_NODE_31080_length_238_cov_1.468927_g30751_i0 PRJNA454503 31080 238 1.468927 3.49604626 Pseudomonadati 3379134 Bacteria Bacteria 136 8.02e-39   NR OFW22326.1 1797178 g30751 i0 77.2 3.98319327731092 79 18 99.6 0 238 2 68 146 OFW22326.1 MAG: hypothetical protein A3H27_11770 [Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13] diamond 948 136 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RIFCSPLOWO2_02_FULL_59_13
32888594 32888594 PRJNA454503_P_NODE_79280_length_204_cov_0.909091_g78951_i0 PRJNA454503 79280 204 0.909091 1.85454564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 87 5.42e-18   NR MCC6992890.1 1978231 g78951 i0 52.2 1.97058823529412 67 32 98.5 0 203 3 42 108 MCC6992890.1 ABC transporter ATP-binding protein [Acidobacteriota bacterium] diamond 402 87 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;