RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA454503" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA454503 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1093845 1093845 PRJNA454503_P_NODE_65521_length_208_cov_0.884354_g65192_i0 PRJNA454503 65521 208 0.884354 1.83945632 Viruses 10239 Viruses Viruses 385 1.58e-102   NTclustered gi|2054640328|tpg|BK051800.1| 2219103 g65192 i0 100 18.9759615384615 208 0 100 0 1 208 7541 7334 MAG TPA_asm: Inoviridae sp. isolate ctJG56, partial genome blastn 3947 385 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
15745111 15745111 PRJNA454503_P_NODE_43853_length_222_cov_1.614907_g43524_i0 PRJNA454503 43853 222 1.614907 3.58509354 Inoviridae sp. 2219103 Viruses Viruses 344 2.9e-90   NTclustered gi|2059617279|tpg|BK037425.1| 2219103 g43524 i0 94.595 69 222 12 100 0 1 222 8733 8512 MAG TPA_asm: Inoviridae sp. isolate cta6A2, partial genome blastn 15318 344 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
20219993 20219993 PRJNA454503_P_NODE_50216_length_215_cov_1.688312_g49887_i0 PRJNA454503 50216 215 1.688312 3.6298708 Viruses 10239 Viruses Viruses 398 2.1099999999999997e-106   NTclustered gi|2054444724|tpg|BK036222.1| 2219103 g49887 i0 100 74.7209302325581 215 0 100 0 1 215 8810 9024 MAG TPA_asm: Inoviridae sp. isolate ctSjg4, partial genome blastn 16065 398 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
22119198 22119198 PRJNA454503_P_NODE_59978_length_209_cov_2.337838_g59649_i0 PRJNA454503 59978 209 2.337838 4.88608142 Inoviridae sp. 2219103 Viruses Viruses 353 4.489999999999999e-93   NTclustered gi|2056811783|tpg|BK057524.1| 2219103 g59649 i0 97.129 3.67464114832536 209 6 100 0 1 209 3473 3265 MAG TPA_asm: Inoviridae sp. isolate ctvvg3, partial genome blastn 768 353 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;