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contig_metadata

15 rows where bioproject = "PRJNA454503" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJNA454503 · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
442669 442669 PRJNA454503_P_NODE_58661_length_210_cov_0.872483_g58332_i0 PRJNA454503 58661 210 0.872483 1.8322143 Monoraphidium minutum 39955 Plants Plants 84.3 7.62e-20   NR KAI8467981.1 39955 g58332 i0 72.5 3.64285714285714 51 14 72.9 0 205 53 1 51 KAI8467981.1 MAG: ribosomal protein L39e [Monoraphidium minutum] diamond 765 84.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
4269052 4269052 PRJNA454503_P_NODE_12624_length_319_cov_2.282946_g12295_i0 PRJNA454503 12624 319 2.282946 7.28259774 Eukaryota 2759 Plants Plants 119 1.47e-32   NR GIL72205.1 1737510 g12295 i0 65.7 2.84952978056426 102 35 95.9 0 315 10 3 104 GIL72205.1 hypothetical protein Vretifemale_2583 [Volvox reticuliferus] diamond 909 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
5545804 5545804 PRJNA454503_P_NODE_19885_length_269_cov_1.254808_g19556_i0 PRJNA454503 19885 269 1.254808 3.37543352 Eukaryota 2759 Plants Plants 151 2.94e-45   NR PNG99168.1 47790 g19556 i0 85.2 52.182156133829 88 13 98.1 0 264 1 36 123 PNG99168.1 Histone H2A, partial [Tetrabaena socialis] diamond 14037 151 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Tetrabaenaceae Tetrabaena Tetrabaena socialis
11296625 11296625 PRJNA454503_P_NODE_12509_length_321_cov_0.873077_g12180_i0 PRJNA454503 12509 321 0.873077 2.80257717 Bryopsis 3128 Plants Plants 357 5.7e-94   NTclustered gi|969822372|gb|KT950953.1| 3129 g12180 i0 86.834 93.1183800623053 319 42 99 0 3 321 674 356 Bryopsis maxima actin gene, partial cds blastn 29891 357 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis maxima
18294396 18294396 PRJNA454503_P_NODE_69055_length_207_cov_0.890411_g68726_i0 PRJNA454503 69055 207 0.890411 1.84315077 Auxenochlorella protothecoides 3075 Plants Plants 98.6 1.7799999999999995e-23   NR XP_011401943.1 3075 g68726 i0 89.5 1.68115942028985 57 6 82.6 0 30 200 5 61 XP_011401943.1 Proteasome subunit alpha type-2 [Auxenochlorella protothecoides] diamond 348 98.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
19567986 19567986 PRJNA454503_P_NODE_24276_length_252_cov_1.361257_g23947_i0 PRJNA454503 24276 252 1.361257 3.43036764 Coccomyxa subellipsoidea 248742 Plants Plants 283 7.44e-72   NTclustered gi|1360638125|gb|AC277041.1| 574566 g23947 i0 87.008 13.4246031746032 254 30 100 3 1 252 39584 39836 Coccomyxa subellipsoidea C-169 clone FAHX05-A01, complete sequence blastn 3383 283 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
22119492 22119492 PRJNA454503_P_NODE_84998_length_202_cov_0.921986_g84669_i0 PRJNA454503 84998 202 0.921986 1.86241172 Eukaryota 2759 Plants Plants 67.4 4.07e-11   NR KXZ42645.1 33097 g84669 i0 78.4 5.4950495049505 37 8 55 0 112 2 27 63 KXZ42645.1 hypothetical protein GPECTOR_128g548 [Gonium pectorale] diamond 1110 67.8 0.994100294985251 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
26981164 26981164 PRJNA454503_P_NODE_72882_length_206_cov_0.896552_g72553_i0 PRJNA454503 72882 206 0.896552 1.84689712 Symbiochloris irregularis 706552 Plants Plants 74.3 1.17e-14   NR KAK9810667.1 706552 g72553 i0 54.4 2.98543689320388 68 31 99 0 2 205 13 80 KAK9810667.1 hypothetical protein WJX73_008788 [Symbiochloris irregularis] diamond 615 74.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
27661158 27661158 PRJNA454503_P_NODE_45924_length_220_cov_1.459119_g45595_i0 PRJNA454503 45924 220 1.459119 3.2100618 root 1 Root_unresolved Root_unresolved 60.5 1.31e-8   NR KAL4855172.1 3077 g45595 i0 48.3 6.84545454545455 60 30 80.5 1 36 212 98 157 KAL4855172.1 Oil body-associated protein 1A [Chlorella vulgaris] diamond 1506 60.8 0.995065789473684 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
27929032 27929032 PRJNA454503_P_NODE_59325_length_210_cov_0.872483_g58996_i0 PRJNA454503 59325 210 0.872483 1.8322143 [Myrmecia] bisecta 41462 Plants Plants 67.4 5.05e-11   NR KAK9803026.1 41462 g58996 i0 44.8 3.92857142857143 67 37 95.7 0 7 207 802 868 KAK9803026.1 hypothetical protein WJX72_005333 [[Myrmecia] bisecta] diamond 825 67.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
28687015 28687015 PRJNA454503_P_NODE_38267_length_229_cov_1.369048_g37938_i0 PRJNA454503 38267 229 1.369048 3.13511992 Scenedesmus sp. PABB 2909984 Plants Plants 51.2 3.27e-5   NR KAF8061359.1 2742167 g37938 i0 50 1.36244541484716 60 21 77.3 2 220 44 5 56 KAF8061359.1 gghA [Scenedesmus sp. PABB004] diamond 312 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
30644696 30644696 PRJNA454503_P_NODE_54773_length_211_cov_0.866667_g54444_i0 PRJNA454503 54773 211 0.866667 1.82866737 [Myrmecia] bisecta 41462 Plants Plants 81.3 5.83e-18   NR KAK9811884.1 41462 g54444 i0 50.7 0.95260663507109 67 32 93.8 1 205 8 26 92 KAK9811884.1 hypothetical protein WJX72_011786 [[Myrmecia] bisecta] diamond 201 81.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
30819080 30819080 PRJNA454503_P_NODE_75034_length_205_cov_0.902778_g74705_i0 PRJNA454503 75034 205 0.902778 1.8506949 Eukaryota 2759 Plants Plants 104 4.51e-25   NR KAK2075724.1 3111 g74705 i0 67.6 20.8829268292683 68 22 99.5 0 204 1 22 89 KAK2075724.1 26S proteasome non-ATPase regulatory subunit 7 B [Prototheca wickerhamii] diamond 4281 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
30882175 30882175 PRJNA454503_P_NODE_72474_length_206_cov_0.896552_g72145_i0 PRJNA454503 72474 206 0.896552 1.84689712 Chlamydomonadales 3042 Plants Plants 70.5 3.81e-12   NR XP_001703012.1 3055 g72145 i0 55.2 8.78155339805825 67 27 96.1 2 198 1 154 218 XP_001703012.1 uncharacterized protein CHLRE_12g514650v5 [Chlamydomonas reinhardtii] diamond 1809 71.2 0.990168539325843 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
32825806 32825806 PRJNA454503_P_NODE_82120_length_203_cov_0.915493_g81791_i0 PRJNA454503 82120 203 0.915493 1.85845079 Picochlorum sp. BPE23 2696299 Plants Plants 58.5 2.31e-8   NR KAI8109338.1 2696299 g81791 i0 48.4 1.89162561576355 64 33 94.6 0 3 194 114 177 KAI8109338.1 hypothetical protein M9434_000622 [Picochlorum sp. BPE23] diamond 384 58.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Picochlorum Picochlorum sp. BPE23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;