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contig_metadata

11 rows where bioproject = "PRJNA454503", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 11 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 11 ✖

bioproject 1

  • PRJNA454503 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
442031 442031 PRJNA454503_P_NODE_14201_length_305_cov_1.065574_g13872_i0 PRJNA454503 14201 305 1.065574 3.2500007 Rhabditida 6236 Nematoda Nematoda 71.2 2.39e-12   NR KHN75984.1 6265 g13872 i0 68.5 5.81311475409836 54 17 53.1 0 1 162 143 196 KHN75984.1 60S ribosomal protein L19 [Toxocara canis] diamond 1773 71.6 0.994413407821229 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
2993209 2993209 PRJNA454503_P_NODE_50723_length_215_cov_1.266234_g50394_i0 PRJNA454503 50723 215 1.266234 2.7224031 Micoletzkya masseyi 1250333 Nematoda Nematoda 148 2.35e-31   NTclustered gi|410992313|gb|JX163985.1| 1250333 g50394 i0 81.667 2.49302325581395 180 31 83 2 4 182 188 10 Micoletzkya masseyi large subunit ribosomal protein 9 (rpl-9) mRNA, partial cds blastn 536 148 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Micoletzkya Micoletzkya masseyi
10646704 10646704 PRJNA454503_P_NODE_75069_length_205_cov_0.902778_g74740_i0 PRJNA454503 75069 205 0.902778 1.8506949 Plectus 49353 Nematoda Nematoda 106 5.16e-25   NR AOW68740.1 70689 g74740 i0 91.2 2.98536585365854 68 6 99.5 0 2 205 147 214 AOW68740.1 cytochrome c oxidase subunit I [Plectus acuminatus] diamond 612 106 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Plectida Plectidae Plectus Plectus acuminatus
11921673 11921673 PRJNA454503_P_NODE_82950_length_203_cov_0.915493_g82621_i0 PRJNA454503 82950 203 0.915493 1.85845079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99 1.53e-22   NR NP_001021254.1 6239 g82621 i0 72.3 58.6256157635468 65 16 96.1 1 5 199 1 63 NP_001021254.1 Large ribosomal subunit protein uL3 [Caenorhabditis elegans] diamond 11901 100 0.99 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
15744726 15744726 PRJNA454503_P_NODE_17873_length_279_cov_1.706422_g17544_i0 PRJNA454503 17873 279 1.706422 4.76091738 Nematoda 6231 Nematoda Nematoda 82.4 3.99e-17   NR TKR94882.1 34508 g17544 i0 64.4 6.38709677419355 59 21 63.4 0 279 103 125 183 TKR94882.1 hypothetical protein L596_009114 [Steinernema carpocapsae] diamond 1782 82.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
18293692 18293692 PRJNA454503_P_NODE_14075_length_306_cov_1.379592_g13746_i0 PRJNA454503 14075 306 1.379592 4.22155152 Strongyloides ratti 34506 Nematoda Nematoda 220 7.39e-53   NTclustered gi|1376152387|ref|XM_024644732.1| 34506 g13746 i0 79.933 7.61437908496732 299 60 98 0 8 306 428 130 Strongyloides ratti Peptidyl-prolyl cis-trans isomerase B (SRAE_X000039200), partial mRNA blastn 2330 220 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
24669013 24669013 PRJNA454503_P_NODE_77660_length_204_cov_0.909091_g77331_i0 PRJNA454503 77660 204 0.909091 1.85454564 Toxocara canis 6265 Nematoda Nematoda 120 4.87e-33   NR KHN88886.1 6265 g77331 i0 92.5 0.985294117647059 67 5 98.5 0 202 2 42 108 KHN88886.1 40S ribosomal protein S17 [Toxocara canis] diamond 201 120 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
28766004 28766004 PRJNA454503_P_NODE_55907_length_211_cov_0.866667_g55578_i0 PRJNA454503 55907 211 0.866667 1.82866737 Rhabditida 6236 Nematoda Nematoda 71.6 3.53e-14   NR VDD96816.1 51028 g55578 i0 84.6 2.72985781990521 39 6 55.5 0 210 94 67 105 VDD96816.1 unnamed protein product [Enterobius vermicularis] diamond 576 71.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis
28955779 28955779 PRJNA454503_P_NODE_44288_length_222_cov_1.211180_g43959_i0 PRJNA454503 44288 222 1.21118 2.6888196 Opisthokonta 33154 Nematoda Nematoda 55.5 1.38e-7   NR VDM96114.1 103827 g43959 i0 66 4.10810810810811 47 16 63.5 0 158 18 37 83 VDM96114.1 unnamed protein product [Thelazia callipaeda] diamond 912 55.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
29823194 29823194 PRJNA454503_P_NODE_55751_length_211_cov_0.866667_g55422_i0 PRJNA454503 55751 211 0.866667 1.82866737 Toxocara canis 6265 Nematoda Nematoda 59.7 2.59e-8   NR KHN84466.1 6265 g55422 i0 50.7 2.01895734597156 71 32 99.5 2 2 211 72 140 KHN84466.1 DnaJ -like protein subfamily A member 2 [Toxocara canis] diamond 426 59.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
31530050 31530050 PRJNA454503_P_NODE_64236_length_208_cov_0.884354_g63907_i0 PRJNA454503 64236 208 0.884354 1.83945632 Diploscapter pachys 2018661 Nematoda Nematoda 78.2 8.7e-16   NR PAV60058.1 2018661 g63907 i0 59.6 0.822115384615385 57 23 82.2 0 36 206 31 87 PAV60058.1 hypothetical protein WR25_19544 [Diploscapter pachys] diamond 171 78.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;