RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA454503" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA454503 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9370590 9370590 PRJNA454503_P_NODE_68808_length_207_cov_0.890411_g68479_i0 PRJNA454503 68808 207 0.890411 1.84315077 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.018   NTclustered gi|2794963713|ref|XM_067880453.1| 2049356 g68479 i0 100 0.135265700483092 28 0 14 0 92 119 15338 15311 Monocercomonoides exilis putative Cell morphogenesis N-terminal (MONOS_9911), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
13195614 13195614 PRJNA454503_P_NODE_12991_length_316_cov_0.862745_g12662_i0 PRJNA454503 12991 316 0.862745 2.7262742 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 65.8 3.8e-6   NTclustered gi|2319615616|ref|XR_007835995.1| 412133 g12662 i0 90.385 0.737341772151899 52 2 16 3 156 206 2610 2561 Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0034210), rRNA blastn 233 65.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;