RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA454503", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

  • Discoba · 4 ✖

bioproject 1

  • PRJNA454503 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17019515 17019515 PRJNA454503_P_NODE_23514_length_255_cov_1.030928_g23185_i0 PRJNA454503 23514 255 1.030928 2.6288664 Parabodo sp. 2815827 Euglenozoa other_Eukaryota 305 1.61e-78   NTclustered gi|2563881272|gb|OR452794.1| 2815827 g23185 i0 96.257 69.5529411764706 187 5 73 2 2 187 660 475 Parabodo sp. isolate MCu-07_N2 small subunit ribosomal RNA gene, partial sequence blastn 17736 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo sp.
26981167 26981167 PRJNA454503_P_NODE_81922_length_203_cov_0.915493_g81593_i0 PRJNA454503 81922 203 0.915493 1.85845079 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 59.3 3.19e-8   NR KAJ9450176.1 91374 g81593 i0 37 1.07881773399015 73 34 90.1 1 17 199 614 686 KAJ9450176.1 Laminin subunit alpha [Diplonema papillatum] diamond 219 59.3 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
27107552 27107552 PRJNA454503_P_NODE_26862_length_244_cov_1.830601_g26533_i0 PRJNA454503 26862 244 1.830601 4.46666644 Bodo saltans 75058 Euglenozoa other_Eukaryota 103 5.6799999999999995e-25   NR CUG06241.1 75058 g26533 i0 56.2 0.897540983606557 73 32 89.8 0 2 220 119 191 CUG06241.1 Hypothetical protein, putative [Bodo saltans] diamond 219 103 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29665180 29665180 PRJNA454503_P_NODE_75930_length_205_cov_0.902778_g75601_i0 PRJNA454503 75930 205 0.902778 1.8506949 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 58.5 5.78e-8   NR KAJ9446475.1 91374 g75601 i0 43.3 4.06829268292683 60 32 87.8 1 3 182 171 228 KAJ9446475.1 putative cytokinin riboside 5prime-monophosphate phosphoribohydrolase LOGL1 [Diplonema papillatum] diamond 834 58.5 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;