RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA454154", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA454154 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17019264 17019264 PRJNA454154_S_NODE_394_length_182_cov_8.055172_g391_i0 PRJNA454154 394 182 8.055172 14.66041304 Embata laticeps 1234258 Rotifera other_Eukaryota 272 1.0899999999999999e-68   NTclustered gi|1345605787|gb|KY781181.1| 1234258 g391 i0 100 80.8406593406593 147 0 81 0 36 182 537 391 Embata laticeps isolate MSAK27 small subunit ribosomal RNA gene, partial sequence blastn 14713 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Embata Embata laticeps
32115636 32115636 PRJNA454154_S_NODE_98_length_286_cov_2.763052_g95_i0 PRJNA454154 98 286 2.763052 7.90232872 Metazoa 33208 Rotifera other_Eukaryota 99.4 2.1e-24   NR RNA36257.1 10195 g95 i0 78.6 6.46153846153846 56 12 58.7 0 283 116 75 130 RNA36257.1 40S ribosomal S15Aa [Brachionus plicatilis] diamond 1848 99.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;