RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA454154", tax_kingdom = "Fungi" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA454154 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19567747 19567747 PRJNA454154_S_NODE_216_length_219_cov_42.445055_g213_i0 PRJNA454154 216 219 42.445055 92.95467045 Rhodotorula sp. 10.10.L31 1834876 Fungi Fungi 156 1.44e-33   NTclustered gi|1021087362|gb|KT970781.1| 1834876 g213 i0 80.184 99.5205479452055 217 35 99 7 2 218 28 236 Rhodotorula sp. 10.10.L31 26S ribosomal RNA gene, partial sequence blastn 21795 156 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula sp. 10.10.L31
22118468 22118468 PRJNA454154_S_NODE_678_length_150_cov_9.592920_g675_i0 PRJNA454154 678 150 9.59292 14.38938 Kwoniella europaea 1247712 Fungi Fungi 56.5 0.001   NTclustered gi|2752987063|ref|XM_066226084.1| 1423913 g675 i0 100 0.706666666666667 30 0 20 0 68 97 399 370 Kwoniella europaea PYCC6329 uncharacterized protein (V865_002281), partial mRNA blastn 106 56.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella europaea
31514708 31514708 PRJNA454154_S_NODE_596_length_157_cov_1.541667_g593_i0 PRJNA454154 596 157 1.541667 2.42041719 Fungi 4751 Fungi Fungi 46.6 4.33e-5   NR THH01048.1 98765 g593 i0 84.6 8.88535031847134 26 4 49.7 0 155 78 38 63 THH01048.1 hypothetical protein EW026_g1579 [Hermanssonia centrifuga] diamond 1395 46.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Meruliaceae Hermanssonia Hermanssonia centrifuga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;