RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA453567" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA453567 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31434865 31434865 PRJNA453567_P_NODE_14276_length_240_cov_2.078818_g14039_i0 PRJNA453567 14276 240 2.078818 4.9891632 Thermoplasmata archaeon 1906666 Archaea Archaea 57 2.96e-7   NR HTT45388.1 1906666 g14039 i0 61.7 1.3125 47 18 58.8 0 10 150 96 142 HTT45388.1 SDR family NAD(P)-dependent oxidoreductase [Thermoplasmata archaeon] diamond 315 57 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31656170 31656170 PRJNA453567_P_NODE_12957_length_256_cov_1.196347_g12720_i0 PRJNA453567 12957 256 1.196347 3.06264832 Thermoplasmatales archaeon B_DKE 1961136 Archaea Archaea 91.3 3.13e-19   NR OWP57015.1 1961136 g12720 i0 48.2 2.98828125 85 44 99.6 0 2 256 330 414 OWP57015.1 MAG: hypothetical protein B2I17_02260 [Thermoplasmatales archaeon B_DKE] diamond 765 91.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon B_DKE
32447569 32447569 PRJNA453567_P_NODE_19659_length_200_cov_0.957055_g19422_i0 PRJNA453567 19659 200 0.957055 1.91411 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 68.9 9.01e-12   NR RJU98321.1 2163009 g19422 i0 45.6 1.02 68 35 99 1 199 2 38 105 RJU98321.1 MAG: DMT family transporter [Candidatus Poseidoniales archaeon] diamond 204 68.9 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;