RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA453567" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA453567 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29507572 29507572 PRJNA453567_P_NODE_12230_length_264_cov_2.568282_g11993_i0 PRJNA453567 12230 264 2.568282 6.78026448 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 68.6 3.76e-11   NR HXG46567.1 2072417 g11993 i0 67.4 1.07954545454545 46 15 52.3 0 154 17 399 444 HXG46567.1 arylsulfatase [Candidatus Methylomirabilota bacterium] diamond 285 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30771398 30771398 PRJNA453567_P_NODE_8274_length_337_cov_2.633333_g8037_i0 PRJNA453567 8274 337 2.633333 8.87433221 Candidatus Methylomirabilales bacterium 3159508 Bacteria Bacteria 49.7 3.74e-4   NR MFI5338639.1 3159508 g8037 i0 67.7 0.275964391691395 31 10 27.6 0 182 90 243 273 MFI5338639.1 NAD(P)/FAD-dependent oxidoreductase [Candidatus Methylomirabilales bacterium] diamond 93 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales     Candidatus Methylomirabilales bacterium
32825760 32825760 PRJNA453567_P_NODE_13780_length_246_cov_1.708134_g13543_i0 PRJNA453567 13780 246 1.708134 4.20200964 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.5 0.0174   NR HEY7037749.1 2072417 g13543 i0 37.7 0.939024390243902 77 40 93.9 1 12 242 20 88 HEY7037749.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 231 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;