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contig_metadata

32 rows where bioproject = "PRJNA453567", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 32 ✖

tax_kingdom 1

  • Pseudomonadati · 32 ✖

bioproject 1

  • PRJNA453567 · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18293491 18293491 PRJNA453567_P_NODE_25875_length_172_cov_2.014815_g25638_i0 PRJNA453567 25875 172 2.014815 3.4654818 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 89.4 6.670000000000001e-21   NR MCB0369389.1 2053517 g25638 i0 71.9 0.994186046511628 57 15 99.4 1 172 2 16 71 MCB0369389.1 hypothetical protein [Bdellovibrionales bacterium] diamond 171 89.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
18293611 18293611 PRJNA453567_P_NODE_9515_length_308_cov_2.446494_g9278_i0 PRJNA453567 9515 308 2.446494 7.53520152 root 1 Root_unresolved Root_unresolved 157 6.130000000000001e-44   NR WP_061836723.1 959 g9278 i0 73.5 30.7012987012987 102 27 99.4 0 2 307 211 312 WP_061836723.1 acyl-CoA dehydrogenase family protein [Bdellovibrio bacteriovorus] diamond 9456 158 0.993670886075949 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
19567590 19567590 PRJNA453567_P_NODE_16536_length_220_cov_2.464481_g16299_i0 PRJNA453567 16536 220 2.464481 5.4218582 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 279 8.210000000000001e-71   NTclustered gi|578016248|gb|CP002190.1| 765869 g16299 i0 90.323 418.877272727273 217 15 96 3 10 220 613175 612959 Bdellovibrio bacteriovorus W, complete genome blastn 92153 279 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
25319614 25319614 PRJNA453567_P_NODE_1560_length_933_cov_2.992188_g1432_i0 PRJNA453567 1560 933 2.992188 27.91711404 Bdellovibrio 958 Bacteria Bacteria 874 0   NTclustered gi|2800941903|gb|CP168974.1| 959 g1432 i0 83.723 283.190782422294 983 101 99 29 6 933 784026 785004 Bdellovibrio bacteriovorus strain s4 chromosome, complete genome blastn 264217 874 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
26886468 26886468 PRJNA453567_P_NODE_22761_length_184_cov_1.591837_g22524_i0 PRJNA453567 22761 184 1.591837 2.92898008 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 70.1 3.16e-14   NR MCB0369536.1 2053517 g22524 i0 71.7 0.75 46 13 75 0 25 162 1 46 MCB0369536.1 hypothetical protein [Bdellovibrionales bacterium] diamond 138 70.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
26917932 26917932 PRJNA453567_P_NODE_22482_length_185_cov_2.108108_g22245_i0 PRJNA453567 22482 185 2.108108 3.8999998 Oligoflexia bacterium 2599941 Bacteria Bacteria 45.1 0.00265   NR HMO01501.1 2599941 g22245 i0 50 1.44324324324324 38 19 61.6 0 171 58 189 226 HMO01501.1 heavy metal translocating P-type ATPase [Oligoflexia bacterium] diamond 267 45.1 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia       Oligoflexia bacterium
27234182 27234182 PRJNA453567_P_NODE_4483_length_495_cov_1.617904_g4250_i0 PRJNA453567 4483 495 1.617904 8.0086248 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 184 1.1699999999999999e-52   NR MCB0368268.1 2053517 g4250 i0 66.3 1.04242424242424 172 50 99.4 1 1 492 294 465 MCB0368268.1 DUF4215 domain-containing protein [Bdellovibrionales bacterium] diamond 516 184 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27234187 27234187 PRJNA453567_P_NODE_8043_length_344_cov_1.931596_g7806_i0 PRJNA453567 8043 344 1.931596 6.64469024 Bdellovibrio svalbardensis 2972972 Bacteria Bacteria 72.8 5.86e-13   NR WP_277579593.1 2972972 g7806 i0 43.1 1.78779069767442 102 52 89 1 339 34 57 152 WP_277579593.1 phosphatase PAP2-related protein [Bdellovibrio svalbardensis] diamond 615 72.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio svalbardensis
27392344 27392344 PRJNA453567_P_NODE_29883_length_160_cov_1.577236_g29646_i0 PRJNA453567 29883 160 1.577236 2.5235776 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 61.6 3.72e-10   NR MCB0369389.1 2053517 g29646 i0 75 0.675 36 8 65.6 1 3 107 115 150 MCB0369389.1 hypothetical protein [Bdellovibrionales bacterium] diamond 108 61.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27929011 27929011 PRJNA453567_P_NODE_27465_length_167_cov_1.461538_g27228_i0 PRJNA453567 27465 167 1.461538 2.44076846 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 97.1 7.73e-22   NR MCB0368268.1 2053517 g27228 i0 70.4 0.970059880239521 54 16 97 0 1 162 142 195 MCB0368268.1 DUF4215 domain-containing protein [Bdellovibrionales bacterium] diamond 162 97.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28118286 28118286 PRJNA453567_P_NODE_20185_length_197_cov_1.218750_g19948_i0 PRJNA453567 20185 197 1.21875 2.4009375 Bacteriovoracales bacterium 2497611 Bacteria Bacteria 47.8 2.53e-4   NR MFI5390229.1 2497611 g19948 i0 58.8 0.517766497461929 34 14 51.8 0 158 57 148 181 MFI5390229.1 START domain-containing protein [Bacteriovoracales bacterium] diamond 102 47.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales     Bacteriovoracales bacterium
28150128 28150128 PRJNA453567_P_NODE_27605_length_167_cov_0.900000_g27368_i0 PRJNA453567 27605 167 0.9 1.503 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 58.5 3.5e-8   NR MCB0368268.1 2053517 g27368 i0 50 0.970059880239521 54 27 97 0 2 163 247 300 MCB0368268.1 DUF4215 domain-containing protein [Bdellovibrionales bacterium] diamond 162 58.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28370960 28370960 PRJNA453567_P_NODE_34046_length_150_cov_1.380531_g33809_i0 PRJNA453567 34046 150 1.380531 2.0707965 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 71.2 1.02e-13   NR MCB0371036.1 2053517 g33809 i0 79.1 2.78 43 9 86 0 20 148 4 46 MCB0371036.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 417 71.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28434212 28434212 PRJNA453567_P_NODE_9366_length_311_cov_2.273723_g9129_i0 PRJNA453567 9366 311 2.273723 7.07127853 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 151 2.64e-45   NR MCB0368288.1 2053517 g9129 i0 79.8 1.81350482315113 94 19 90.7 0 291 10 6 99 MCB0368288.1 hypothetical protein [Bdellovibrionales bacterium] diamond 564 151 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28560547 28560547 PRJNA453567_P_NODE_1067_length_1139_cov_4.428312_g978_i0 PRJNA453567 1067 1139 4.428312 50.43847368 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 351 1.63e-115   NR MCB0386755.1 2053517 g978 i0 50.8 0.93766461808604 356 158 90.1 9 102 1127 27 379 MCB0386755.1 C1 family peptidase [Bdellovibrionales bacterium] diamond 1068 351 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28592111 28592111 PRJNA453567_P_NODE_15727_length_227_cov_1.731579_g15490_i0 PRJNA453567 15727 227 1.731579 3.93068433 Micavibrio sp. 2024841 Bacteria Bacteria 76.3 3.89e-14   NR MFA5591951.1 2024841 g15490 i0 49.3 1.98237885462555 75 38 99.1 0 227 3 9 83 MFA5591951.1 acyl-CoA dehydrogenase [Micavibrio sp.] diamond 450 76.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
28844416 28844416 PRJNA453567_P_NODE_30708_length_158_cov_1.289256_g30471_i0 PRJNA453567 30708 158 1.289256 2.03702448 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 63.5 2.34e-11   NR MCB0368288.1 2053517 g30471 i0 73.7 0.721518987341772 38 10 72.2 0 3 116 62 99 MCB0368288.1 hypothetical protein [Bdellovibrionales bacterium] diamond 114 63.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29633541 29633541 PRJNA453567_P_NODE_25030_length_175_cov_1.695652_g24793_i0 PRJNA453567 25030 175 1.695652 2.967391 Halobacteriovorax sp. 2020862 Bacteria Bacteria 62 2.4e-9   NR WP_372651143.1 2020862 g24793 i0 60.8 0.874285714285714 51 20 87.4 0 154 2 466 516 WP_372651143.1 ATP-binding protein [Halobacteriovorax sp.] diamond 153 62 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax sp.
29696696 29696696 PRJNA453567_P_NODE_19570_length_200_cov_1.644172_g19333_i0 PRJNA453567 19570 200 1.644172 3.288344 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 97.4 1.1099999999999999e-23   NR MBP9675022.1 2081706 g19333 i0 88.2 0.765 51 6 76.5 0 199 47 74 124 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 153 97.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29760072 29760072 PRJNA453567_P_NODE_14971_length_234_cov_0.989848_g14734_i0 PRJNA453567 14971 234 0.989848 2.31624432 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 63.5 1.64e-10   NR MCB0369157.1 2053517 g14734 i0 43.3 0.858974358974359 67 37 84.6 1 224 27 64 130 MCB0369157.1 RICIN domain-containing protein [Bdellovibrionales bacterium] diamond 201 63.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29981368 29981368 PRJNA453567_P_NODE_20871_length_193_cov_1.743590_g20634_i0 PRJNA453567 20871 193 1.74359 3.3651287 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 114 3.8499999999999996e-31   NR MCB0370082.1 2053517 g20634 i0 84.4 0.994818652849741 64 10 99.5 0 1 192 21 84 MCB0370082.1 hypothetical protein [Bdellovibrionales bacterium] diamond 192 114 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30234108 30234108 PRJNA453567_P_NODE_8752_length_325_cov_1.184028_g8515_i0 PRJNA453567 8752 325 1.184028 3.848091 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 110 1.15e-25   NR MDQ3234618.1 2026715 g8515 i0 55 1.00615384615385 109 47 99.7 2 2 325 197 304 MDQ3234618.1 PAS domain S-box protein [Pseudobdellovibrionaceae bacterium] diamond 327 110 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
30581407 30581407 PRJNA453567_P_NODE_14033_length_243_cov_1.635922_g13796_i0 PRJNA453567 14033 243 1.635922 3.97529046 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 45.4 0.00161   NR MCB0368769.1 2053517 g13796 i0 36.3 0.987654320987654 80 50 98.8 1 242 3 17 95 MCB0368769.1 hypothetical protein [Bdellovibrionales bacterium] diamond 240 45.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30739597 30739597 PRJNA453567_P_NODE_3094_length_623_cov_1.590444_g2885_i0 PRJNA453567 3094 623 1.590444 9.90846612 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 53.9 1.37e-4   NR MCB0368268.1 2053517 g2885 i0 33 0.914927768860353 106 58 45.7 4 472 188 28 131 MCB0368268.1 DUF4215 domain-containing protein [Bdellovibrionales bacterium] diamond 570 53.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31213139 31213139 PRJNA453567_P_NODE_33155_length_152_cov_1.486957_g32918_i0 PRJNA453567 33155 152 1.486957 2.26017464 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 92 6.619999999999999e-23   NR MCB0369780.1 2053517 g32918 i0 93.2 0.868421052631579 44 3 86.8 0 3 134 33 76 MCB0369780.1 protein kinase [Bdellovibrionales bacterium] diamond 132 92 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31340036 31340036 PRJNA453567_P_NODE_20136_length_197_cov_1.462500_g19899_i0 PRJNA453567 20136 197 1.4625 2.881125 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 97.1 1.5099999999999998e-23   NR MBP9675022.1 2081706 g19899 i0 85.5 0.83756345177665 55 8 83.8 0 33 197 6 60 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 165 97.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
31498408 31498408 PRJNA453567_P_NODE_7256_length_365_cov_1.185976_g7019_i0 PRJNA453567 7256 365 1.185976 4.3288124 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 166 5.43e-50   NR MCB0370084.1 2053517 g7019 i0 79.4 0.797260273972603 97 20 79.7 0 1 291 65 161 MCB0370084.1 hypothetical protein [Bdellovibrionales bacterium] diamond 291 166 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31656193 31656193 PRJNA453567_P_NODE_8297_length_337_cov_1.193333_g8060_i0 PRJNA453567 8297 337 1.193333 4.02153221 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 125 7.799999999999999e-31   NR MEW6057924.1 3034175 g8060 i0 51.9 0.961424332344214 108 52 96.1 0 14 337 245 352 MEW6057924.1 response regulator [Bdellovibrionota bacterium] diamond 324 125 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
32035982 32035982 PRJNA453567_P_NODE_7078_length_370_cov_1.405405_g6841_i0 PRJNA453567 7078 370 1.405405 5.1999985 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 238 5.51e-74   NR MCB0370360.1 2053517 g6841 i0 100 0.997297297297297 123 0 99.7 0 1 369 345 467 MCB0370360.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 369 238 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32210474 32210474 PRJNA453567_P_NODE_31578_length_156_cov_1.302521_g31341_i0 PRJNA453567 31578 156 1.302521 2.03193276 Bacteriovoracales 2024979 Bacteria Bacteria 79.7 7.71e-16   NR MBC7538931.1 2608087 g31341 i0 70.6 11.6346153846154 51 15 98.1 0 155 3 235 285 MBC7538931.1 PLP-dependent transferase [Bacteriovorax sp.] diamond 1815 79.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax sp.
32384016 32384016 PRJNA453567_P_NODE_15919_length_225_cov_2.074468_g15682_i0 PRJNA453567 15919 225 2.074468 4.667553 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 50.4 5.42e-5   NR MCB0368270.1 2053517 g15682 i0 38 0.946666666666667 71 44 94.7 0 13 225 58 128 MCB0368270.1 hypothetical protein [Bdellovibrionales bacterium] diamond 213 50.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32668214 32668214 PRJNA453567_P_NODE_29180_length_162_cov_1.416000_g28943_i0 PRJNA453567 29180 162 1.416 2.29392 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 58.9 9.27e-10   NR MCB0368226.1 2053517 g28943 i0 97.1 0.62962962962963 34 1 63 0 103 2 2 35 MCB0368226.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 102 58.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;