RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA453567", tax_kingdom = "Promethearchaeati" and tax_phylum = "Candidatus Thorarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 1 ✖

tax_kingdom 1

  • Promethearchaeati · 1 ✖

bioproject 1

  • PRJNA453567 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27928997 27928997 PRJNA453567_P_NODE_13285_length_252_cov_1.446512_g13048_i0 PRJNA453567 13285 252 1.446512 3.64521024 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 41.6 0.0454   NR MBN2230322.1 2053491 g13048 i0 38.9 0.642857142857143 54 32 63.1 1 13 171 76 129 MBN2230322.1 hypothetical protein [Candidatus Thorarchaeota archaeon] diamond 162 41.6 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;