RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA453567", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA453567 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14470450 14470450 PRJNA453567_P_NODE_1972_length_820_cov_2.560664_g1820_i0 PRJNA453567 1972 820 2.560664 20.9974448 Eukaryota 2759 Fungi Fungi 407 1.97e-141   NR EPZ33659.1 988480 g1820 i0 77.2 7.40853658536585 250 57 91.5 0 14 763 1 250 EPZ33659.1 60S ribosomal protein L8 [Rozella allomycis CSF55] diamond 6075 409 0.995110024449878 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28812677 28812677 PRJNA453567_P_NODE_11608_length_273_cov_1.322034_g11371_i0 PRJNA453567 11608 273 1.322034 3.60915282 Rozella allomycis CSF55 988480 Fungi Fungi 142 2.14e-40   NR EPZ35724.1 988480 g11371 i0 76.1 0.967032967032967 88 21 96.7 0 9 272 122 209 EPZ35724.1 Adenylate kinase [Rozella allomycis CSF55] diamond 264 142 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30234090 30234090 PRJNA453567_P_NODE_16912_length_218_cov_1.055249_g16675_i0 PRJNA453567 16912 218 1.055249 2.3004428200000002 Rozella allomycis CSF55 988480 Fungi Fungi 42.4 0.0372   NR RKP20251.1 988480 g16675 i0 34.5 0.756880733944954 55 34 75.7 1 32 196 216 268 RKP20251.1 hypothetical protein ROZALSC1DRAFT_28243 [Rozella allomycis CSF55] diamond 165 42.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31229579 31229579 PRJNA453567_P_NODE_18995_length_203_cov_3.753012_g18758_i0 PRJNA453567 18995 203 3.753012 7.61861436 Eukaryota 2759 Fungi Fungi 76.3 9.34e-15   NR EPZ34692.1 988480 g18758 i0 63.9 4.3448275862069 61 21 88.7 1 182 3 190 250 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 882 76.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;