RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA453567", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA453567 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27044537 27044537 PRJNA453567_P_NODE_24102_length_179_cov_1.098592_g23865_i0 PRJNA453567 24102 179 1.098592 1.96647968 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 47 4.52e-4   NR ETO31775.1 46433 g23865 i0 52.6 1.39106145251397 38 17 62 1 177 67 206 243 ETO31775.1 hypothetical protein RFI_05343 [Reticulomyxa filosa] diamond 249 47 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27581568 27581568 PRJNA453567_P_NODE_20984_length_193_cov_0.993590_g20747_i0 PRJNA453567 20984 193 0.99359 1.9176287 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00119   NR ETO25163.1 46433 g20747 i0 49.2 0.979274611398964 63 25 87 2 193 26 426 488 ETO25163.1 ubiquitin protein ligase [Reticulomyxa filosa] diamond 189 46.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
27865673 27865673 PRJNA453567_P_NODE_2925_length_644_cov_2.046129_g2724_i0 PRJNA453567 2925 644 2.046129 13.17707076 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 116 1.86e-27   NR ETO17596.1 46433 g2724 i0 55 1.1832298136646 120 50 54 1 644 297 189 308 ETO17596.1 hypothetical protein RFI_19726 [Reticulomyxa filosa] diamond 762 116 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28465872 28465872 PRJNA453567_P_NODE_5946_length_412_cov_1.850667_g5710_i0 PRJNA453567 5946 412 1.850667 7.62474804 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 53.1 5.05e-5   NR ETO13313.1 46433 g5710 i0 34.8 0.502427184466019 69 45 50.2 0 204 410 444 512 ETO13313.1 hypothetical protein RFI_24060 [Reticulomyxa filosa] diamond 207 53.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30170790 30170790 PRJNA453567_P_NODE_26632_length_170_cov_1.172932_g26395_i0 PRJNA453567 26632 170 1.172932 1.9939844 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 60.5 7.65e-9   NR ETO31882.1 46433 g26395 i0 47.3 0.970588235294118 55 29 97.1 0 1 165 44 98 ETO31882.1 hypothetical protein RFI_05233 [Reticulomyxa filosa] diamond 165 60.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;