RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA453567", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA453567 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30707961 30707961 PRJNA453567_P_NODE_17274_length_215_cov_1.533708_g17037_i0 PRJNA453567 17274 215 1.533708 3.2974722 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 74.3 1.88e-13   NR MFH1208780.1 2035772 g17037 i0 63 1.50697674418605 54 19 74 1 213 55 517 570 MFH1208780.1 adenine deaminase [Candidatus Omnitrophota bacterium] diamond 324 74.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32337236 32337236 PRJNA453567_P_NODE_9699_length_305_cov_1.152985_g9462_i0 PRJNA453567 9699 305 1.152985 3.51660425 PVC group 1783257 Bacteria Bacteria 45.4 0.00851   NR MCG3176387.1 2035772 g9462 i0 43.9 1.15081967213115 57 30 54.1 2 123 287 131 187 MCG3176387.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 351 45.8 0.991266375545852 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;