RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA453567", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 10 ✖

tax_clade 1

  • Metamonada · 10 ✖

bioproject 1

  • PRJNA453567 · 10 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26823093 26823093 PRJNA453567_P_NODE_23241_length_182_cov_1.613793_g23004_i0 PRJNA453567 23241 182 1.613793 2.93710326 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 74.3 2.47e-14   NR GKT14968.1 2918883 g23004 i0 76.1 2.19230769230769 46 11 75.8 0 40 177 85 130 GKT14968.1 Eukaryotic translation elongation factor 2, partial [Aduncisulcus paluster] diamond 399 74.3 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27186977 27186977 PRJNA453567_P_NODE_14322_length_240_cov_1.344828_g14085_i0 PRJNA453567 14322 240 1.344828 3.2275872 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.5 5.51e-6   NR TNJ26588.1 5742 g14085 i0 48.9 1.7625 45 23 56.3 0 17 151 145 189 TNJ26588.1 pVSP [Giardia muris] diamond 423 53.9 0.992578849721707 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
27928998 27928998 PRJNA453567_P_NODE_13625_length_248_cov_1.582938_g13388_i0 PRJNA453567 13625 248 1.582938 3.92568624 Giardia intestinalis 5741 Fornicata other_Eukaryota 47.8 6.63e-4   NR ESU35555.1 5741 g13388 i0 47.6 1.48790322580645 42 22 50.8 0 246 121 176 217 ESU35555.1 Variant-specific surface protein [Giardia intestinalis] diamond 369 47.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29602023 29602023 PRJNA453567_P_NODE_11970_length_268_cov_1.181818_g11733_i0 PRJNA453567 11970 268 1.181818 3.16727224 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 58.9 9.15e-8   NR KAG9390902.1 201153 g11733 i0 49.2 0.66044776119403 59 29 64.9 1 40 213 267 325 KAG9390902.1 hypothetical protein J8273_7167 [Carpediemonas membranifera] diamond 177 58.9 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29823177 29823177 PRJNA453567_P_NODE_6991_length_373_cov_1.794643_g6754_i0 PRJNA453567 6991 373 1.794643 6.69401839 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 102 1.92e-24   NR KAG9392310.1 201153 g6754 i0 41.3 1.93833780160858 121 70 96.5 1 372 13 41 161 KAG9392310.1 calcineurin regulatory subunit B [Carpediemonas membranifera] diamond 723 102 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
29886723 29886723 PRJNA453567_P_NODE_28951_length_163_cov_1.238095_g28714_i0 PRJNA453567 28951 163 1.238095 2.01809485 Hexamita inflata 28002 Fornicata other_Eukaryota 73.6 1.73e-13   NR CAK8766063.1 28002 g28714 i0 61.1 6.95705521472393 54 21 99.4 0 162 1 4444 4497 CAK8766063.1 HINF_083375 [Hexamita inflata] diamond 1134 73.6 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
30155241 30155241 PRJNA453567_P_NODE_31192_length_157_cov_1.283333_g30955_i0 PRJNA453567 31192 157 1.283333 2.01483281 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47 3.48e-4   NR ESU44104.1 5741 g30955 i0 46.9 11.5222929936306 49 25 91.7 1 4 147 113 161 ESU44104.1 Variant-specific surface protein [Giardia intestinalis] diamond 1809 47 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30581416 30581416 PRJNA453567_P_NODE_21453_length_190_cov_1.490196_g21216_i0 PRJNA453567 21453 190 1.490196 2.8313724 Giardia lamblia P15 658858 Fornicata other_Eukaryota 44.3 0.00526   NR EFO60884.1 658858 g21216 i0 38 0.789473684210526 50 31 78.9 0 1 150 279 328 EFO60884.1 VSP with INR [Giardia lamblia P15] diamond 150 44.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30661031 30661031 PRJNA453567_P_NODE_26493_length_170_cov_1.616541_g26256_i0 PRJNA453567 26493 170 1.616541 2.7481197 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 45.1 0.00216   NR CAK8815363.1 28002 g26256 i0 36.7 2.68235294117647 49 31 86.5 0 23 169 365 413 CAK8815363.1 HINF_013575 [Hexamita inflata] diamond 456 45.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
31624696 31624696 PRJNA453567_P_NODE_18796_length_205_cov_1.255952_g18559_i0 PRJNA453567 18796 205 1.255952 2.5747016 Kipferlia bialata 797122 Fornicata other_Eukaryota 54.3 1.23e-6   NR GIQ83287.1 797122 g18559 i0 41.5 0.951219512195122 65 33 90.7 2 1 186 143 205 GIQ83287.1 hypothetical protein KIPB_004585 [Kipferlia bialata] diamond 195 54.3 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;