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contig_metadata

6 rows where bioproject = "PRJNA453567", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA453567 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28197622 28197622 PRJNA453567_P_NODE_20406_length_196_cov_0.981132_g20169_i0 PRJNA453567 20406 196 0.981132 1.92301872 FCB group 1783270 Bacteria Bacteria 46.2 0.00116   NR PID57971.1 2026749 g20169 i0 47.9 2.15816326530612 48 22 71.9 3 54 194 7 52 PID57971.1 MAG: oligoendopeptidase F [Ignavibacteriota bacterium] diamond 423 46.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
28860705 28860705 PRJNA453567_P_NODE_9248_length_314_cov_1.404332_g9011_i0 PRJNA453567 9248 314 1.404332 4.40960248 Pseudomonadati 3379134 Bacteria Bacteria 44.3 0.00931   NR MBK7575806.1 2053306 g9011 i0 49.1 4.73885350318471 53 24 50.6 2 129 287 42 91 MBK7575806.1 ankyrin repeat domain-containing protein [Ignavibacteria bacterium] diamond 1488 44.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29791634 29791634 PRJNA453567_P_NODE_12411_length_262_cov_1.715556_g12174_i0 PRJNA453567 12411 262 1.715556 4.49475672 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 43.9 0.019   NR MBI2428639.1 2049428 g12174 i0 37.9 0.66412213740458 58 35 65.3 1 261 91 538 595 MBI2428639.1 T9SS type A sorting domain-containing protein [Ignavibacteriales bacterium] diamond 174 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
30265993 30265993 PRJNA453567_P_NODE_31852_length_155_cov_1.627119_g31615_i0 PRJNA453567 31852 155 1.627119 2.52203445 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 48.5 1.02e-4   NR HOJ38718.1 2049428 g31615 i0 54 1.95483870967742 50 17 96.8 1 151 2 423 466 HOJ38718.1 response regulator [Ignavibacteriales bacterium] diamond 303 48.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32747429 32747429 PRJNA453567_P_NODE_16580_length_220_cov_1.491803_g16343_i0 PRJNA453567 16580 220 1.491803 3.2819666 Bacteria 2 Bacteria Bacteria 117 1.61e-31   NR PKL85413.1 2013808 g16343 i0 73.6 4.90909090909091 72 19 98.2 0 3 218 7 78 PKL85413.1 MAG: lactoylglutathione lyase [Ignavibacteriae bacterium HGW-Ignavibacteriae-1] diamond 1080 118 0.991525423728814 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriae bacterium HGW-Ignavibacteriae-1
32904798 32904798 PRJNA453567_P_NODE_8220_length_339_cov_1.801325_g7983_i0 PRJNA453567 8220 339 1.801325 6.10649175 Bacteria 2 Bacteria Bacteria 107 5.73e-26   NR OGU55931.1 1798432 g7983 i0 50 9.07964601769912 114 49 98.2 3 334 2 61 169 OGU55931.1 MAG: hypothetical protein A2V66_18155 [Ignavibacteria bacterium RBG_13_36_8] diamond 3078 108 0.990740740740741 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium RBG_13_36_8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;