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contig_metadata

13 rows where bioproject = "PRJNA453567", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 13 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 13 ✖

bioproject 1

  • PRJNA453567 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11920656 11920656 PRJNA453567_P_NODE_28210_length_165_cov_1.218750_g27973_i0 PRJNA453567 28210 165 1.21875 2.0109375 uncultured Gemmatimonadales bacterium 412054 Bacteria Bacteria 111 2.24e-20   NTclustered gi|2874253728|emb|OY969570.1| 412054 g27973 i0 80 54.5393939393939 155 28 93 3 1 154 1524637 1524789 MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 blastn 8999 111 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     uncultured Gemmatimonadales bacterium
18293446 18293446 PRJNA453567_P_NODE_1915_length_837_cov_2.653750_g1765_i0 PRJNA453567 1915 837 2.65375 22.2118875 Roseisolibacter 2093335 Bacteria Bacteria 214 1.1000000000000001e-65   NR WP_284348513.1 2014610 g1765 i0 72.1 0.974910394265233 136 37 48.7 1 1 408 81 215 WP_284348513.1 pyridoxamine 5'-phosphate oxidase [Roseisolibacter agri] diamond 816 216 0.990740740740741 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae Roseisolibacter Roseisolibacter agri
26791374 26791374 PRJNA453567_P_NODE_17381_length_214_cov_1.762712_g17144_i0 PRJNA453567 17381 214 1.762712 3.77220368 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 50.1 6.69e-5   NR MDH3495164.1 2026742 g17144 i0 63.9 0.504672897196262 36 12 50.5 1 145 38 6 40 MDH3495164.1 NAD-dependent malic enzyme [Gemmatimonadota bacterium] diamond 108 50.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
27138924 27138924 PRJNA453567_P_NODE_15082_length_233_cov_1.193878_g14845_i0 PRJNA453567 15082 233 1.193878 2.78173574 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 70.5 2.42e-12   NR MFL5495210.1 2448054 g14845 i0 48.1 1.7381974248927 77 34 96.6 2 9 233 9 81 MFL5495210.1 MOSC domain-containing protein [Gemmatimonadales bacterium] diamond 405 70.5 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
27503312 27503312 PRJNA453567_P_NODE_21403_length_190_cov_1.797386_g21166_i0 PRJNA453567 21403 190 1.797386 3.4150334 Bacteria 2 Bacteria Bacteria 62 1.8e-9   NR MEJ2540457.1 2026742 g21166 i0 63.8 2.27368421052632 47 16 74.2 1 175 35 170 215 MEJ2540457.1 SDR family NAD(P)-dependent oxidoreductase [Gemmatimonadota bacterium] diamond 432 62 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28592116 28592116 PRJNA453567_P_NODE_22067_length_187_cov_1.560000_g21830_i0 PRJNA453567 22067 187 1.56 2.9172 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 57.8 5.93e-8   NR MBU6365795.1 2026742 g21830 i0 45.8 7.47593582887701 59 31 94.7 1 9 185 58 115 MBU6365795.1 triose-phosphate isomerase [Gemmatimonadota bacterium] diamond 1398 57.8 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
28812679 28812679 PRJNA453567_P_NODE_13548_length_249_cov_1.466981_g13311_i0 PRJNA453567 13548 249 1.466981 3.65278269 Gemmatimonadales bacterium 2448054 Bacteria Bacteria 65.1 3.7e-10   NR HEX6106214.1 2448054 g13311 i0 46 3.46987951807229 63 31 75.9 1 17 205 7 66 HEX6106214.1 hypothetical protein [Gemmatimonadales bacterium] diamond 864 65.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales     Gemmatimonadales bacterium
29065750 29065750 PRJNA453567_P_NODE_4208_length_516_cov_2.367432_g3975_i0 PRJNA453567 4208 516 2.367432 12.21594912 Longimicrobium sp. 2029185 Bacteria Bacteria 174 1.05e-51   NR HEX8430849.1 2029185 g3975 i0 56.5 2.91860465116279 168 69 97.1 4 14 514 28 192 HEX8430849.1 SDR family NAD(P)-dependent oxidoreductase [Longimicrobium sp.] diamond 1506 174 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Longimicrobiia Longimicrobiales Longimicrobiaceae Longimicrobium Longimicrobium sp.
29412787 29412787 PRJNA453567_P_NODE_11449_length_275_cov_1.474790_g11212_i0 PRJNA453567 11449 275 1.47479 4.0556725 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 90.9 6.42e-19   NR MDQ6872943.1 2026742 g11212 i0 48.9 0.96 88 44 96 1 273 10 59 145 MDQ6872943.1 beta galactosidase jelly roll domain-containing protein [Gemmatimonadota bacterium] diamond 264 90.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
29981365 29981365 PRJNA453567_P_NODE_17311_length_215_cov_1.258427_g17074_i0 PRJNA453567 17311 215 1.258427 2.70561805 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 51.2 2.68e-5   NR HEV7990963.1 2026741 g17074 i0 36.8 0.795348837209302 57 33 75.3 1 215 54 356 412 HEV7990963.1 protein kinase [Gemmatimonadaceae bacterium] diamond 171 51.2 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
30707952 30707952 PRJNA453567_P_NODE_10514_length_289_cov_2.777778_g10277_i0 PRJNA453567 10514 289 2.777778 8.02777842 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 45.4 0.00653   NR MEP6779286.1 2026741 g10277 i0 39.2 0.768166089965398 74 28 70.6 3 227 24 44 106 MEP6779286.1 alpha/beta fold hydrolase [Gemmatimonadaceae bacterium] diamond 222 45.4 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
31055915 31055915 PRJNA453567_P_NODE_3115_length_621_cov_2.988014_g2905_i0 PRJNA453567 3115 621 2.988014 18.55556694 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 53.1 2.59e-4   NR MCL7926990.1 2026742 g2905 i0 29.8 3.29468599033816 168 102 81.2 5 15 518 23 174 MCL7926990.1 long-chain fatty acid--CoA ligase [Gemmatimonadota bacterium] diamond 2046 53.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32194261 32194261 PRJNA453567_P_NODE_12758_length_258_cov_1.285068_g12521_i0 PRJNA453567 12758 258 1.285068 3.31547544 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 53.1 2.57e-6   NR MEA2063503.1 2026742 g12521 i0 67.6 7.6046511627907 34 11 39.5 0 103 2 3 36 MEA2063503.1 50S ribosomal protein L9 [Gemmatimonadota bacterium] diamond 1962 53.1 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;