RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA453567", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA453567 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28876118 28876118 PRJNA453567_P_NODE_19588_length_200_cov_1.435583_g19351_i0 PRJNA453567 19588 200 1.435583 2.871166 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 63.9 4.08e-11   NR MDP6698523.1 2053570 g19351 i0 47 1.98 66 35 99 0 200 3 30 95 MDP6698523.1 amidohydrolase family protein [Candidatus Latescibacterota bacterium] diamond 396 63.9 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29696695 29696695 PRJNA453567_P_NODE_18110_length_209_cov_2.104651_g17873_i0 PRJNA453567 18110 209 2.104651 4.39872059 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 58.2 8.08e-8   NR MFC1552187.1 2053570 g17873 i0 56.3 2.06698564593301 48 21 68.9 0 66 209 1 48 MFC1552187.1 zinc-binding dehydrogenase [Candidatus Latescibacterota bacterium] diamond 432 58.2 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;