contig_metadata
53 rows where bioproject = "PRJNA453111" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 441418 | 441418 | PRJNA453111_P_NODE_12801_length_242_cov_0.911243_g12709_i0 | PRJNA453111 | 12801 | 242 | 0.911243 | 2.20520806 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 137 | 2.03e-36 | NR | WP_407176481.1 | 578924 | g12709 | i0 | 75 | 32.7272727272727 | 80 | 20 | 99.2 | 0 | 242 | 3 | 276 | 355 | WP_407176481.1 isocitrate lyase [Bradyrhizobium sp. STM 3562] | diamond | 7920 | 137 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. STM 3562 | ||
| 2992025 | 2992025 | PRJNA453111_P_NODE_10683_length_249_cov_0.875000_g10591_i0 | PRJNA453111 | 10683 | 249 | 0.875 | 2.17875 | Terribium terrae | 2725666 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1752754875|gb|CP044218.1| | 2725666 | g10591 | i0 | 100 | 64.6706827309237 | 249 | 0 | 100 | 0 | 1 | 249 | 3572184 | 3571936 | Mesorhizobium terrae strain NIBRBAC000500504 chromosome, complete genome | blastn | 16103 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Terribium | Terribium terrae | ||
| 4268436 | 4268436 | PRJNA453111_P_NODE_13024_length_241_cov_0.916667_g12932_i0 | PRJNA453111 | 13024 | 241 | 0.916667 | 2.20916747 | Bradyrhizobium sp. PSBB068 | 2715960 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|1979381481|gb|CP069300.1| | 2715960 | g12932 | i0 | 100 | 42.7966804979253 | 241 | 0 | 100 | 0 | 1 | 241 | 4027655 | 4027415 | Bradyrhizobium sp. PSBB068 chromosome, complete genome | blastn | 10314 | 446 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. PSBB068 | ||
| 4921033 | 4921033 | PRJNA453111_P_NODE_9424_length_260_cov_1.133690_g9332_i0 | PRJNA453111 | 9424 | 260 | 1.13369 | 2.947594 | root | 1 | Root_unresolved | Root_unresolved | 481 | 2.55e-131 | NTclustered | gi|1214359213|gb|MF424753.1| | 1613 | g9332 | i0 | 100 | 194 | 260 | 0 | 100 | 0 | 1 | 260 | 878 | 1137 | Limosilactobacillus fermentum strain CAU6386 16S ribosomal RNA gene, partial sequence | blastn | 50440 | 481 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Limosilactobacillus fermentum | ||
| 5545095 | 5545095 | PRJNA453111_P_NODE_10285_length_250_cov_0.870056_g10193_i0 | PRJNA453111 | 10285 | 250 | 0.870056 | 2.17514 | Bradyrhizobium sp. PSBB068 | 2715960 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1979381481|gb|CP069300.1| | 2715960 | g10193 | i0 | 100 | 97.756 | 250 | 0 | 100 | 0 | 1 | 250 | 5136916 | 5136667 | Bradyrhizobium sp. PSBB068 chromosome, complete genome | blastn | 24439 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Nitrobacteraceae | Bradyrhizobium | Bradyrhizobium sp. PSBB068 | ||
| 5545173 | 5545173 | PRJNA453111_P_NODE_605_length_1046_cov_2.182939_g546_i0 | PRJNA453111 | 605 | 1046 | 2.182939 | 22.83354194 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 286 | 6.49e-86 | NR | MDJ0869580.1 | 2818507 | g546 | i0 | 42.8 | 1.76099426386233 | 306 | 156 | 87.8 | 5 | 84 | 1001 | 511 | 797 | MDJ0869580.1 BPTI/Kunitz-type proteinase inhibitor domain-containing protein [Myxococcota bacterium] | diamond | 1842 | 286 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 6195904 | 6195904 | PRJNA453111_P_NODE_665_length_1003_cov_2.348387_g605_i0 | PRJNA453111 | 665 | 1003 | 2.348387 | 23.55432161 | Cetobacterium | 180162 | Bacteria | Bacteria | 1803 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g605 | i0 | 99.103 | 526.341974077767 | 1003 | 9 | 100 | 0 | 1 | 1003 | 278688 | 279690 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 527921 | 1803 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 8094537 | 8094537 | PRJNA453111_P_NODE_11727_length_246_cov_0.890173_g11635_i0 | PRJNA453111 | 11727 | 246 | 0.890173 | 2.18982558 | Streptomyces sp. NBC_00564 | 2903663 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2667518664|gb|CP107786.1| | 2903663 | g11635 | i0 | 100 | 0.121951219512195 | 30 | 0 | 12 | 0 | 30 | 59 | 1030285 | 1030256 | Streptomyces sp. NBC_00564 strain NBC 00564 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00564 | ||
| 9369277 | 9369277 | PRJNA453111_P_NODE_12448_length_243_cov_0.905882_g12356_i0 | PRJNA453111 | 12448 | 243 | 0.905882 | 2.20129326 | Ralstonia insidiosa | 190721 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1036241154|gb|CP016023.1| | 190721 | g12356 | i0 | 100 | 83.8600823045268 | 243 | 0 | 100 | 0 | 1 | 243 | 339164 | 338922 | Ralstonia insidiosa strain ATCC 49129 chromosome 2, complete sequence | blastn | 20378 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia insidiosa | ||
| 10645251 | 10645251 | PRJNA453111_P_NODE_12669_length_242_cov_1.822485_g12577_i0 | PRJNA453111 | 12669 | 242 | 1.822485 | 4.4104137 | Pendulispora albinea | 2741071 | Bacteria | Bacteria | 348 | 2.48e-91 | NTclustered | gi|2698035964|gb|CP089984.1| | 2741071 | g12577 | i0 | 92.562 | 162.900826446281 | 242 | 18 | 100 | 0 | 1 | 242 | 3588997 | 3589238 | Pendulispora albinea strain MSr11954 chromosome, complete genome | blastn | 39422 | 348 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora albinea | ||
| 11920196 | 11920196 | PRJNA453111_P_NODE_2350_length_535_cov_16.965368_g2258_i0 | PRJNA453111 | 2350 | 535 | 16.965368 | 90.7647188 | Chryseobacterium gallinarum | 1324352 | Bacteria | Bacteria | 134 | 1.82e-26 | NTclustered | gi|1830200908|gb|CP050996.1| | 1324352 | g2258 | i0 | 100 | 0.65981308411215 | 72 | 0 | 13 | 0 | 1 | 72 | 1140 | 1069 | Chryseobacterium gallinarum strain FDAARGOS_636 plasmid unnamed2 | blastn | 353 | 134 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gallinarum | |
| 11920257 | 11920257 | PRJNA453111_P_NODE_9050_length_267_cov_1.190722_g8958_i0 | PRJNA453111 | 9050 | 267 | 1.190722 | 3.17922774 | Kosakonia arachidis | 551989 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1769903668|gb|CP045299.1| | 551989 | g8958 | i0 | 96.97 | 0.123595505617978 | 33 | 1 | 12 | 0 | 203 | 235 | 25488 | 25456 | Kosakonia arachidis strain KACC 18508 plasmid unnamed1, complete sequence | blastn | 33 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Kosakonia | Kosakonia arachidis | ||
| 13194969 | 13194969 | PRJNA453111_P_NODE_10151_length_251_cov_0.865169_g10059_i0 | PRJNA453111 | 10151 | 251 | 0.865169 | 2.17157419 | Methyloversatilis sp. RAC08 | 1842540 | Bacteria | Bacteria | 414 | 2.52e-111 | NTclustered | gi|1059487190|gb|CP016448.1| | 1842540 | g10059 | i0 | 96.414 | 224.486055776892 | 251 | 9 | 100 | 0 | 1 | 251 | 844965 | 844715 | Methyloversatilis sp. RAC08 chromosome, complete genome | blastn | 56346 | 414 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Sterolibacteriaceae | Methyloversatilis | Methyloversatilis sp. RAC08 | ||
| 15120687 | 15120687 | PRJNA453111_P_NODE_7952_length_287_cov_1.065421_g7860_i0 | PRJNA453111 | 7952 | 287 | 1.065421 | 3.05775827 | Comamonas | 283 | Bacteria | Bacteria | 486 | 6.139999999999999e-133 | NTclustered | gi|507148303|ref|NR_103106.1| | 285 | g7860 | i0 | 97.213 | 420.620209059233 | 287 | 8 | 100 | 0 | 1 | 287 | 1145 | 1431 | Comamonas testosteroni strain CNB-1 23S ribosomal RNA gene, complete sequence | blastn | 120718 | 486 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas testosteroni | ||
| 16395394 | 16395394 | PRJNA453111_P_NODE_12133_length_244_cov_0.900585_g12041_i0 | PRJNA453111 | 12133 | 244 | 0.900585 | 2.1974274 | Pseudonocardiaceae | 2070 | Bacteria | Bacteria | 407 | 4.08e-109 | NTclustered | gi|2667020334|dbj|AP029207.1| | 1933 | g12041 | i0 | 97.872 | 259.827868852459 | 235 | 5 | 96 | 0 | 1 | 235 | 3410 | 3176 | Streptoalloteichus tenebrarius JCM 4838 DNA, complete genome | blastn | 63398 | 407 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Streptoalloteichus | Streptoalloteichus tenebrarius | ||
| 17018717 | 17018717 | PRJNA453111_P_NODE_13334_length_205_cov_11.060606_g13242_i0 | PRJNA453111 | 13334 | 205 | 11.060606 | 22.6742423 | Chryseobacterium gallinarum | 1324352 | Bacteria | Bacteria | 167 | 6.129999999999999e-37 | NTclustered | gi|1830200908|gb|CP050996.1| | 1324352 | g13242 | i0 | 98.925 | 3.28780487804878 | 93 | 1 | 68 | 0 | 27 | 119 | 1069 | 1161 | Chryseobacterium gallinarum strain FDAARGOS_636 plasmid unnamed2 | blastn | 674 | 167 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gallinarum | |
| 17670479 | 17670479 | PRJNA453111_P_NODE_4714_length_372_cov_1.314381_g4622_i0 | PRJNA453111 | 4714 | 372 | 1.314381 | 4.88949732 | Lachnospiraceae | 186803 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|2813041527|emb|OZ186729.1| | 33038 | g4622 | i0 | 100 | 0.526881720430108 | 28 | 0 | 8 | 0 | 24 | 51 | 2489714 | 2489687 | Mediterraneibacter gnavus isolate LUMC_Rgna_QRD035 genome assembly, chromosome: 1 | blastn | 196 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Mediterraneibacter | Mediterraneibacter gnavus | ||
| 18293023 | 18293023 | PRJNA453111_P_NODE_11675_length_246_cov_0.890173_g11583_i0 | PRJNA453111 | 11675 | 246 | 0.890173 | 2.18982558 | Mixta calida | 665913 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1907656030|gb|CP061511.1| | 665913 | g11583 | i0 | 100 | 0.227642276422764 | 28 | 0 | 11 | 0 | 14 | 41 | 3529897 | 3529870 | Mixta calida strain 5098PV chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Erwiniaceae | Mixta | Mixta calida | ||
| 22117974 | 22117974 | PRJNA453111_P_NODE_658_length_1009_cov_1.802350_g598_i0 | PRJNA453111 | 658 | 1009 | 1.80235 | 18.1857115 | Enterococcus | 1350 | Bacteria | Bacteria | 390 | 8.249999999999998e-132 | NR | WP_413133017.1 | 37734 | g598 | i0 | 56.7 | 3.00891972249752 | 337 | 133 | 96.3 | 2 | 2 | 973 | 29 | 365 | WP_413133017.1 pectate lyase family protein [Enterococcus casseliflavus] | diamond | 3036 | 390 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus casseliflavus | ||
| 23393638 | 23393638 | PRJNA453111_P_NODE_3379_length_442_cov_1.691057_g3287_i0 | PRJNA453111 | 3379 | 442 | 1.691057 | 7.47447194 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 52.8 | 0.043 | NTclustered | gi|2100434541|gb|CP075946.1| | 1502 | g3287 | i0 | 100 | 0.0633484162895928 | 28 | 0 | 6 | 0 | 54 | 81 | 34618 | 34645 | Clostridium perfringens strain 955/85 plasmid pCP955-85 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 23393647 | 23393647 | PRJNA453111_P_NODE_4719_length_372_cov_1.190635_g4627_i0 | PRJNA453111 | 4719 | 372 | 1.190635 | 4.4291622 | Mesorhizobium loti | 381 | Bacteria | Bacteria | 54.7 | 0.01 | NTclustered | gi|1050758791|dbj|AP017605.1| | 381 | g4627 | i0 | 96.875 | 0.161290322580645 | 32 | 1 | 9 | 0 | 154 | 185 | 2839721 | 2839752 | Mesorhizobium loti DNA, nearly complete genome, strain: TONO | blastn | 60 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Mesorhizobium loti | ||
| 24044772 | 24044772 | PRJNA453111_P_NODE_9199_length_264_cov_1.905759_g9107_i0 | PRJNA453111 | 9199 | 264 | 1.905759 | 5.03120376 | Burkholderia | 32008 | Bacteria | Bacteria | 82.4 | 3.08e-11 | NTclustered | gi|2304481520|gb|CP104215.1| | 28095 | g9107 | i0 | 94.34 | 35.9090909090909 | 53 | 3 | 20 | 0 | 17 | 69 | 1071718 | 1071666 | Burkholderia gladioli strain ZN-S4 chromosome 2, complete sequence | blastn | 9480 | 82.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderia | Burkholderia gladioli | ||
| 24667564 | 24667564 | PRJNA453111_P_NODE_11280_length_247_cov_0.885057_g11188_i0 | PRJNA453111 | 11280 | 247 | 0.885057 | 2.18609079 | Helicobacter pylori | 210 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2222110184|gb|CP094161.1| | 210 | g11188 | i0 | 100 | 0.234817813765182 | 29 | 0 | 12 | 0 | 173 | 201 | 1355250 | 1355222 | Helicobacter pylori strain Hpfe0015 chromosome, complete genome | blastn | 58 | 54.7 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 24667579 | 24667579 | PRJNA453111_P_NODE_12500_length_243_cov_0.905882_g12408_i0 | PRJNA453111 | 12500 | 243 | 0.905882 | 2.20129326 | Aquipseudomonas campi | 2731681 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1876483579|gb|CP053697.2| | 2731681 | g12408 | i0 | 96.875 | 0.131687242798354 | 32 | 1 | 13 | 0 | 38 | 69 | 2709033 | 2709002 | Aquipseudomonas campi strain S1-A32-2 chromosome, complete genome | blastn | 32 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Aquipseudomonas | Aquipseudomonas campi | ||
| 26600960 | 26600960 | PRJNA453111_P_NODE_7761_length_290_cov_1.419355_g7669_i0 | PRJNA453111 | 7761 | 290 | 1.419355 | 4.1161295 | Polyangia bacterium | 3058050 | Bacteria | Bacteria | 44.7 | 0.0126 | NR | HSS37185.1 | 3058050 | g7669 | i0 | 38.8 | 1.75862068965517 | 85 | 49 | 85.9 | 2 | 1 | 249 | 99 | 182 | HSS37185.1 adenylosuccinate lyase [Polyangia bacterium] | diamond | 510 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangia bacterium | ||||||
| 26696137 | 26696137 | PRJNA453111_P_NODE_6461_length_318_cov_1.877551_g6369_i0 | PRJNA453111 | 6461 | 318 | 1.877551 | 5.97061218 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 121 | 2.3199999999999997e-30 | NR | MEM6703481.1 | 1978231 | g6369 | i0 | 54.3 | 5.90566037735849 | 105 | 48 | 99.1 | 0 | 3 | 317 | 20 | 124 | MEM6703481.1 S9 family peptidase [Acidobacteriota bacterium] | diamond | 1878 | 121 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 26791359 | 26791359 | PRJNA453111_P_NODE_8841_length_271_cov_1.166667_g8749_i0 | PRJNA453111 | 8841 | 271 | 1.166667 | 3.16166757 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 43.5 | 0.0144 | NR | MDR4473450.1 | 70125 | g8749 | i0 | 48.8 | 0.476014760147601 | 43 | 22 | 47.6 | 0 | 33 | 161 | 115 | 157 | MDR4473450.1 hypothetical protein [Nitrospira sp.] | diamond | 129 | 43.5 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 27123620 | 27123620 | PRJNA453111_P_NODE_10182_length_251_cov_0.814607_g10090_i0 | PRJNA453111 | 10182 | 251 | 0.814607 | 2.04466357 | Brevibacterium | 1696 | Bacteria | Bacteria | 43.1 | 0.0277 | NR | WP_332839751.1 | 946573 | g10090 | i0 | 51.4 | 1.32669322709163 | 37 | 17 | 43 | 1 | 236 | 129 | 210 | 246 | WP_332839751.1 glycosyltransferase family 2 protein [Brevibacterium yomogidense] | diamond | 333 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium yomogidense | ||
| 27138914 | 27138914 | PRJNA453111_P_NODE_7942_length_287_cov_1.084112_g7850_i0 | PRJNA453111 | 7942 | 287 | 1.084112 | 3.11140144 | Variovorax sp. J22R133 | 3053503 | Bacteria | Bacteria | 43.5 | 0.0328 | NR | WP_286562580.1 | 3053503 | g7850 | i0 | 42.9 | 0.585365853658537 | 56 | 30 | 57.5 | 2 | 265 | 101 | 277 | 331 | WP_286562580.1 PglL family O-oligosaccharyltransferase [Variovorax sp. J22R133] | diamond | 168 | 43.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Variovorax | Variovorax brevis | ||
| 27834113 | 27834113 | PRJNA453111_P_NODE_12464_length_243_cov_0.905882_g12372_i0 | PRJNA453111 | 12464 | 243 | 0.905882 | 2.20129326 | Betaproteobacteria bacterium | 1891241 | Bacteria | Bacteria | 44.7 | 0.00771 | NR | MSQ54280.1 | 1891241 | g12372 | i0 | 38.7 | 0.925925925925926 | 75 | 43 | 90.1 | 2 | 19 | 237 | 294 | 367 | MSQ54280.1 MFS transporter [Betaproteobacteria bacterium] | diamond | 225 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Betaproteobacteria bacterium | |||||
| 27913410 | 27913410 | PRJNA453111_P_NODE_6345_length_321_cov_1.862903_g6253_i0 | PRJNA453111 | 6345 | 321 | 1.862903 | 5.97991863 | Enterococcus | 1350 | Bacteria | Bacteria | 124 | 9.619999999999999e-32 | NR | WP_413133017.1 | 37734 | g6253 | i0 | 55.8 | 1.94392523364486 | 104 | 45 | 97.2 | 1 | 3 | 314 | 206 | 308 | WP_413133017.1 pectate lyase family protein [Enterococcus casseliflavus] | diamond | 624 | 125 | 0.992 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus casseliflavus | ||
| 28055094 | 28055094 | PRJNA453111_P_NODE_5745_length_337_cov_1.659091_g5653_i0 | PRJNA453111 | 5745 | 337 | 1.659091 | 5.59113667 | Spiribacter pallidus | 1987936 | Bacteria | Bacteria | 44.7 | 0.0213 | NR | WP_367985223.1 | 1987936 | g5653 | i0 | 28.4 | 0.72106824925816 | 81 | 48 | 63.2 | 2 | 49 | 261 | 119 | 199 | WP_367985223.1 CynX/NimT family MFS transporter [Spiribacter pallidus] | diamond | 243 | 44.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Ectothiorhodospiraceae | Spiribacter | Spiribacter pallidus | ||
| 28086687 | 28086687 | PRJNA453111_P_NODE_5285_length_351_cov_1.586331_g5193_i0 | PRJNA453111 | 5285 | 351 | 1.586331 | 5.56802181 | Chitinimonas sp. | 1934313 | Bacteria | Bacteria | 78.6 | 2.42e-14 | NR | WP_374349013.1 | 1934313 | g5193 | i0 | 35.1 | 0.974358974358974 | 114 | 74 | 97.4 | 0 | 1 | 342 | 65 | 178 | WP_374349013.1 M35 family metallo-endopeptidase [Chitinimonas sp.] | diamond | 342 | 78.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chitinibacteraceae | Chitinimonas | Chitinimonas sp. | ||
| 28118268 | 28118268 | PRJNA453111_P_NODE_4865_length_366_cov_1.784983_g4773_i0 | PRJNA453111 | 4865 | 366 | 1.784983 | 6.53303778 | Formosa undariae | 1325436 | Bacteria | Bacteria | 43.5 | 0.049 | NR | WP_382380540.1 | 1325436 | g4773 | i0 | 30.2 | 0.704918032786885 | 86 | 57 | 70.5 | 1 | 349 | 92 | 32 | 114 | WP_382380540.1 RNA polymerase sigma factor [Formosa undariae] | diamond | 258 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Formosa | Formosa undariae | |
| 28212843 | 28212843 | PRJNA453111_P_NODE_9366_length_261_cov_1.303191_g9274_i0 | PRJNA453111 | 9366 | 261 | 1.303191 | 3.40132851 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 42.4 | 0.00926 | NR | WP_416493070.1 | 573 | g9274 | i0 | 53.1 | 0.735632183908046 | 64 | 29 | 73.6 | 1 | 55 | 246 | 9 | 71 | WP_416493070.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 192 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28244486 | 28244486 | PRJNA453111_P_NODE_3266_length_450_cov_2.408488_g3174_i0 | PRJNA453111 | 3266 | 450 | 2.408488 | 10.838196 | unclassified Corallococcus | 2685029 | Bacteria | Bacteria | 164 | 3.34e-46 | NR | WP_206797742.1 | 2685029 | g3174 | i0 | 53 | 3.96666666666667 | 149 | 67 | 98.7 | 2 | 448 | 5 | 200 | 346 | WP_206797742.1 MULTISPECIES: M35 family metallo-endopeptidase [unclassified Corallococcus] | diamond | 1785 | 164 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | |||
| 28307889 | 28307889 | PRJNA453111_P_NODE_11166_length_247_cov_1.327586_g11074_i0 | PRJNA453111 | 11166 | 247 | 1.327586 | 3.27913742 | Archangium sp. | 1872627 | Bacteria | Bacteria | 59.3 | 5.37e-8 | NR | MDP1828757.1 | 1872627 | g11074 | i0 | 48.8 | 2.97570850202429 | 82 | 34 | 99.6 | 1 | 1 | 246 | 98 | 171 | MDP1828757.1 LysM peptidoglycan-binding domain-containing protein [Archangium sp.] | diamond | 735 | 59.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 28402538 | 28402538 | PRJNA453111_P_NODE_8026_length_286_cov_0.995305_g7934_i0 | PRJNA453111 | 8026 | 286 | 0.995305 | 2.8465723 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 44.7 | 0.0139 | NR | QRN85737.1 | 2044939 | g7934 | i0 | 34.8 | 0.692307692307692 | 66 | 37 | 62.9 | 1 | 56 | 235 | 235 | 300 | QRN85737.1 InlB B-repeat-containing protein [Clostridia bacterium] | diamond | 198 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28686971 | 28686971 | PRJNA453111_P_NODE_12687_length_242_cov_1.366864_g12595_i0 | PRJNA453111 | 12687 | 242 | 1.366864 | 3.30781088 | Enterococcus mundtii | 53346 | Bacteria | Bacteria | 48.9 | 2.35e-4 | NR | WP_010736445.1 | 53346 | g12595 | i0 | 35.7 | 3.47107438016529 | 70 | 45 | 86.8 | 0 | 213 | 4 | 22 | 91 | WP_010736445.1 pectate lyase family protein [Enterococcus mundtii] | diamond | 840 | 48.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus mundtii | ||
| 28686974 | 28686974 | PRJNA453111_P_NODE_2627_length_507_cov_1.774194_g2535_i0 | PRJNA453111 | 2627 | 507 | 1.774194 | 8.99516358 | Bacteroides zhangwenhongii | 2650157 | Bacteria | Bacteria | 53.9 | 5.55e-5 | NR | WP_272720491.1 | 2650157 | g2535 | i0 | 55.6 | 0.21301775147929 | 36 | 16 | 21.3 | 0 | 503 | 396 | 12 | 47 | WP_272720491.1 tetratricopeptide repeat protein, partial [Bacteroides zhangwenhongii] | diamond | 108 | 53.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides zhangwenhongii | |
| 28812660 | 28812660 | PRJNA453111_P_NODE_12328_length_244_cov_0.888889_g12236_i0 | PRJNA453111 | 12328 | 244 | 0.888889 | 2.16888916 | Nitrosomonas | 914 | Bacteria | Bacteria | 43.9 | 0.015 | NR | WP_011111877.1 | 914 | g12236 | i0 | 35 | 0.737704918032787 | 60 | 38 | 73.8 | 1 | 13 | 192 | 421 | 479 | WP_011111877.1 MULTISPECIES: CHASE2 domain-containing protein [Nitrosomonas] | diamond | 180 | 43.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Nitrosomonadaceae | Nitrosomonas | |||
| 29002892 | 29002892 | PRJNA453111_P_NODE_12648_length_243_cov_0.894118_g12556_i0 | PRJNA453111 | 12648 | 243 | 0.894118 | 2.17270674 | Dactylosporangium fulvum | 53359 | Bacteria | Bacteria | 42.7 | 0.0363 | NR | WP_259862636.1 | 53359 | g12556 | i0 | 40 | 0.679012345679012 | 55 | 28 | 61.7 | 1 | 48 | 197 | 443 | 497 | WP_259862636.1 HNH endonuclease signature motif containing protein [Dactylosporangium fulvum] | diamond | 165 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Dactylosporangium | Dactylosporangium fulvum | ||
| 29223649 | 29223649 | PRJNA453111_P_NODE_12589_length_243_cov_0.905882_g12497_i0 | PRJNA453111 | 12589 | 243 | 0.905882 | 2.20129326 | Actinokineospora auranticolor | 155976 | Bacteria | Bacteria | 42.4 | 0.0477 | NR | PPK65354.1 | 155976 | g12497 | i0 | 31.2 | 0.950617283950617 | 77 | 52 | 93.8 | 1 | 243 | 16 | 23 | 99 | PPK65354.1 hypothetical protein CLV40_1146 [Actinokineospora auranticolor] | diamond | 231 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinokineospora | Actinokineospora auranticolor | ||
| 29444234 | 29444234 | PRJNA453111_P_NODE_1410_length_694_cov_1.621578_g1322_i0 | PRJNA453111 | 1410 | 694 | 1.621578 | 11.25375132 | Melissococcus plutonius | 33970 | Bacteria | Bacteria | 130 | 7.26e-32 | NR | WP_231849637.1 | 33970 | g1322 | i0 | 44.6 | 1.45244956772334 | 168 | 88 | 70.5 | 1 | 493 | 5 | 35 | 202 | WP_231849637.1 pectate lyase family protein [Melissococcus plutonius] | diamond | 1008 | 130 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Melissococcus | Melissococcus plutonius | ||
| 30518432 | 30518432 | PRJNA453111_P_NODE_8573_length_276_cov_1.201970_g8481_i0 | PRJNA453111 | 8573 | 276 | 1.20197 | 3.3174372 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 43.1 | 0.0276 | NR | MEI6341235.1 | 2026799 | g8481 | i0 | 46 | 0.543478260869565 | 50 | 25 | 52.2 | 1 | 113 | 256 | 109 | 158 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 150 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31024006 | 31024006 | PRJNA453111_P_NODE_11535_length_246_cov_0.890173_g11443_i0 | PRJNA453111 | 11535 | 246 | 0.890173 | 2.18982558 | Patescibacteria group bacterium | 2052139 | Bacteria | Bacteria | 42.4 | 0.0367 | NR | MEK7112689.1 | 2052139 | g11443 | i0 | 37.8 | 0.902439024390244 | 74 | 31 | 82.9 | 3 | 241 | 38 | 50 | 114 | MEK7112689.1 hypothetical protein [Patescibacteria group bacterium] | diamond | 222 | 42.4 | 1 | Bacteria | Bacteria candidate phyla | Patescibacteria group bacterium | |||||||
| 31181616 | 31181616 | PRJNA453111_P_NODE_12775_length_242_cov_0.911243_g12683_i0 | PRJNA453111 | 12775 | 242 | 0.911243 | 2.20520806 | Candidatus Rifleibacteriota bacterium | 2053586 | Bacteria | Bacteria | 43.1 | 0.0274 | NR | MBQ3644082.1 | 2053586 | g12683 | i0 | 32.9 | 0.867768595041322 | 70 | 46 | 86.8 | 1 | 5 | 214 | 630 | 698 | MBQ3644082.1 CHASE2 domain-containing protein [Candidatus Rifleibacteriota bacterium] | diamond | 210 | 43.1 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Rifleibacteriota | Candidatus Rifleibacteriota bacterium | ||||||
| 31451296 | 31451296 | PRJNA453111_P_NODE_12116_length_244_cov_0.900585_g12024_i0 | PRJNA453111 | 12116 | 244 | 0.900585 | 2.1974274 | Comamonadaceae | 80864 | Bacteria | Bacteria | 41.6 | 0.0289 | NR | WP_006298065.1 | 80880 | g12024 | i0 | 37.7 | 1.63524590163934 | 61 | 35 | 73.8 | 2 | 51 | 230 | 8 | 66 | WP_006298065.1 hypothetical protein [Hylemonella gracilis] | diamond | 399 | 42 | 0.990476190476191 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hylemonella | Hylemonella gracilis | ||
| 31483054 | 31483054 | PRJNA453111_P_NODE_12396_length_243_cov_1.100000_g12304_i0 | PRJNA453111 | 12396 | 243 | 1.1 | 2.673 | root | 1 | Root_unresolved | Root_unresolved | 82.8 | 1.71e-18 | NR | WP_264767160.1 | 573 | g12304 | i0 | 87.5 | 1.97530864197531 | 40 | 5 | 49.4 | 0 | 120 | 1 | 41 | 80 | WP_264767160.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 480 | 83.2 | 0.995192307692308 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 32131075 | 32131075 | PRJNA453111_P_NODE_13318_length_222_cov_6.724832_g13226_i0 | PRJNA453111 | 13318 | 222 | 6.724832 | 14.92912704 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 114 | 1.19e-30 | NR | WP_416532323.1 | 573 | g13226 | i0 | 91.5 | 0.797297297297297 | 59 | 5 | 79.7 | 0 | 45 | 221 | 86 | 144 | WP_416532323.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 177 | 114 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 32415787 | 32415787 | PRJNA453111_P_NODE_12899_length_242_cov_0.911243_g12807_i0 | PRJNA453111 | 12899 | 242 | 0.911243 | 2.20520806 | Nesterenkonia massiliensis | 1232429 | Bacteria | Bacteria | 147 | 5.93e-39 | NR | WP_044494056.1 | 1232429 | g12807 | i0 | 97.5 | 0.991735537190083 | 80 | 2 | 99.2 | 0 | 242 | 3 | 324 | 403 | WP_044494056.1 UvrD-helicase domain-containing protein [Nesterenkonia massiliensis] | diamond | 240 | 147 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Nesterenkonia | Nesterenkonia massiliensis | ||
| 32510914 | 32510914 | PRJNA453111_P_NODE_9719_length_254_cov_2.552486_g9627_i0 | PRJNA453111 | 9719 | 254 | 2.552486 | 6.48331444 | Methylocella sp. | 1978226 | Bacteria | Bacteria | 42 | 0.0203 | NR | HEY4846789.1 | 1978226 | g9627 | i0 | 32.4 | 0.803149606299213 | 68 | 45 | 80.3 | 1 | 1 | 204 | 4 | 70 | HEY4846789.1 helix-turn-helix domain-containing protein [Methylocella sp.] | diamond | 204 | 42 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Beijerinckiaceae | Methylocella | Methylocella sp. | ||
| 32699658 | 32699658 | PRJNA453111_P_NODE_4880_length_366_cov_0.839590_g4788_i0 | PRJNA453111 | 4880 | 366 | 0.83959 | 3.0728994 | Comamonas sp. | 34028 | Bacteria | Bacteria | 42.7 | 0.0464 | NR | MBN9331280.1 | 34028 | g4788 | i0 | 38.2 | 0.450819672131148 | 55 | 32 | 43.4 | 2 | 205 | 363 | 32 | 86 | MBN9331280.1 hypothetical protein [Comamonas sp.] | diamond | 165 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;