RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA453111" and tax_phylum = "Basidiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA453111 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4268445 4268445 PRJNA453111_P_NODE_1804_length_614_cov_1.487985_g1714_i0 PRJNA453111 1804 614 1.487985 9.1362279 Pseudomicrostroma glucosiphilum 1684307 Fungi Fungi 62.1 1.01e-4   NTclustered gi|1418631245|ref|XM_025492137.1| 1684307 g1714 i0 89.796 0.60586319218241 49 4 8 1 94 141 1668 1620 Pseudomicrostroma glucosiphilum hypothetical protein (BCV69DRAFT_281849), mRNA blastn 372 62.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Microstromatales   Pseudomicrostroma Pseudomicrostroma glucosiphilum
4268506 4268506 PRJNA453111_P_NODE_7784_length_290_cov_1.064516_g7692_i0 PRJNA453111 7784 290 1.064516 3.0870964 Cryptococcus amylolentus 104669 Fungi Fungi 54.7 0.007   NTclustered gi|1101795709|ref|XM_019140816.1| 1295533 g7692 i0 100 0.196551724137931 29 0 10 0 257 285 268 240 Cryptococcus amylolentus CBS 6039 hypothetical protein (L202_06346), mRNA blastn 57 54.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus amylolentus
13195024 13195024 PRJNA453111_P_NODE_1371_length_705_cov_1.575949_g1284_i0 PRJNA453111 1371 705 1.575949 11.11044045 Tilletiopsis washingtonensis 58919 Fungi Fungi 399 2.1799999999999995e-106   NTclustered gi|1423587035|ref|XM_025743209.1| 58919 g1284 i0 80.185 24.0482269503546 540 101 76 6 74 610 591 55 Tilletiopsis washingtonensis putative GSP1-GTP-binding protein of the ras superfamily (FA09DRAFT_331860), mRNA blastn 16954 399 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
14470128 14470128 PRJNA453111_P_NODE_9852_length_252_cov_1.290503_g9760_i0 PRJNA453111 9852 252 1.290503 3.25206756 Pseudozyma hubeiensis 327079 Fungi Fungi 228 3.5399999999999984e-55   NTclustered gi|808367612|ref|XM_012333802.1| 1305764 g9760 i0 83.133 15.8809523809524 249 42 99 0 1 249 249 1 Pseudozyma hubeiensis SY62 Ras-like GTPase partial mRNA blastn 4002 228 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma hubeiensis
27282042 27282042 PRJNA453111_P_NODE_11203_length_247_cov_0.885057_g11111_i0 PRJNA453111 11203 247 0.885057 2.18609079 Moniliophthora 221102 Fungi Fungi 50.8 2.3e-5   NR KAI3615789.1 221103 g11111 i0 68.3 0.995951417004049 41 12 48.6 1 3 122 130 170 KAI3615789.1 hypothetical protein WG66_010484 [Moniliophthora roreri] diamond 246 50.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Marasmiaceae Moniliophthora Moniliophthora roreri
29318104 29318104 PRJNA453111_P_NODE_11709_length_246_cov_0.890173_g11617_i0 PRJNA453111 11709 246 0.890173 2.18982558 Mycena epipterygia 230806 Fungi Fungi 43.1 0.0253   NR KAJ7142695.1 230806 g11617 i0 32.5 0.939024390243902 77 43 87.8 3 240 25 17 89 KAJ7142695.1 hypothetical protein C8R44DRAFT_974304 [Mycena epipterygia] diamond 231 43.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena epipterygia
29428916 29428916 PRJNA453111_P_NODE_7209_length_302_cov_1.008734_g7117_i0 PRJNA453111 7209 302 1.008734 3.04637668 Opisthokonta 33154 Fungi Fungi 50.1 4.18e-5   NR XP_047882067.1 378194 g7117 i0 36.5 2.4635761589404 63 40 62.6 0 1 189 64 126 XP_047882067.1 Prefoldin beta-like protein [Epithele typhae] diamond 744 50.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Epitheliaceae Epithele Epithele typhae
30865913 30865913 PRJNA453111_P_NODE_8714_length_273_cov_2.190000_g8622_i0 PRJNA453111 8714 273 2.19 5.9787 Armillaria luteobubalina 153913 Fungi Fungi 43.5 0.0277   NR KAK0495293.1 153913 g8622 i0 44.9 6.68131868131868 49 21 48.4 2 108 239 118 165 KAK0495293.1 hypothetical protein EDD18DRAFT_1394090 [Armillaria luteobubalina] diamond 1824 43.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Armillaria Armillaria luteobubalina
32810382 32810382 PRJNA453111_P_NODE_8420_length_279_cov_1.072816_g8328_i0 PRJNA453111 8420 279 1.072816 2.99315664 Rhizoctonia 1322061 Fungi Fungi 47 0.00178   NR KAF8710838.1 456999 g8328 i0 58.1 1 31 13 33.3 0 180 272 405 435 KAF8710838.1 hypothetical protein RHS03_01746, partial [Rhizoctonia solani] diamond 279 47 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;