RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA453111", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA453111 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1716223 1716223 PRJNA453111_P_NODE_11562_length_246_cov_0.890173_g11470_i0 PRJNA453111 11562 246 0.890173 2.18982558 Corticium candelabrum 121492 Porifera other_Eukaryota 69.7 1.01e-11   NR XP_062522203.1 121492 g11470 i0 73.2 1 41 11 50 0 2 124 150 190 XP_062522203.1 uncharacterized protein LOC134196990 isoform X1 [Corticium candelabrum] diamond 246 69.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
26632930 26632930 PRJNA453111_P_NODE_8001_length_286_cov_1.323944_g7909_i0 PRJNA453111 8001 286 1.323944 3.78647984 Oscarella lobularis 121494 Porifera other_Eukaryota 66.6 1.17e-10   NR XP_065842422.1 121494 g7909 i0 49.2 7.1013986013986 65 33 68.2 0 282 88 133 197 XP_065842422.1 COP9 signalosome complex subunit 7b-like isoform X2 [Oscarella lobularis] diamond 2031 66.6 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Oscarellidae Oscarella Oscarella lobularis
29665121 29665121 PRJNA453111_P_NODE_4530_length_380_cov_0.951140_g4438_i0 PRJNA453111 4530 380 0.95114 3.614332 Amphimedon queenslandica 400682 Porifera other_Eukaryota 95.5 4.3e-20   NR XP_003383670.2 400682 g4438 i0 75.4 2.86578947368421 69 17 54.5 0 172 378 89 157 XP_003383670.2 PREDICTED: 26S protease regulatory subunit 6B-like [Amphimedon queenslandica] diamond 1089 95.5 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;