contig_metadata
14 rows where bioproject = "PRJNA453111" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4921033 | 4921033 | PRJNA453111_P_NODE_9424_length_260_cov_1.133690_g9332_i0 | PRJNA453111 | 9424 | 260 | 1.13369 | 2.947594 | root | 1 | Root_unresolved | Root_unresolved | 481 | 2.55e-131 | NTclustered | gi|1214359213|gb|MF424753.1| | 1613 | g9332 | i0 | 100 | 194 | 260 | 0 | 100 | 0 | 1 | 260 | 878 | 1137 | Limosilactobacillus fermentum strain CAU6386 16S ribosomal RNA gene, partial sequence | blastn | 50440 | 481 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Limosilactobacillus | Limosilactobacillus fermentum | ||
| 8094537 | 8094537 | PRJNA453111_P_NODE_11727_length_246_cov_0.890173_g11635_i0 | PRJNA453111 | 11727 | 246 | 0.890173 | 2.18982558 | Streptomyces sp. NBC_00564 | 2903663 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2667518664|gb|CP107786.1| | 2903663 | g11635 | i0 | 100 | 0.121951219512195 | 30 | 0 | 12 | 0 | 30 | 59 | 1030285 | 1030256 | Streptomyces sp. NBC_00564 strain NBC 00564 chromosome, complete genome | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00564 | ||
| 16395394 | 16395394 | PRJNA453111_P_NODE_12133_length_244_cov_0.900585_g12041_i0 | PRJNA453111 | 12133 | 244 | 0.900585 | 2.1974274 | Pseudonocardiaceae | 2070 | Bacteria | Bacteria | 407 | 4.08e-109 | NTclustered | gi|2667020334|dbj|AP029207.1| | 1933 | g12041 | i0 | 97.872 | 259.827868852459 | 235 | 5 | 96 | 0 | 1 | 235 | 3410 | 3176 | Streptoalloteichus tenebrarius JCM 4838 DNA, complete genome | blastn | 63398 | 407 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Streptoalloteichus | Streptoalloteichus tenebrarius | ||
| 17670479 | 17670479 | PRJNA453111_P_NODE_4714_length_372_cov_1.314381_g4622_i0 | PRJNA453111 | 4714 | 372 | 1.314381 | 4.88949732 | Lachnospiraceae | 186803 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|2813041527|emb|OZ186729.1| | 33038 | g4622 | i0 | 100 | 0.526881720430108 | 28 | 0 | 8 | 0 | 24 | 51 | 2489714 | 2489687 | Mediterraneibacter gnavus isolate LUMC_Rgna_QRD035 genome assembly, chromosome: 1 | blastn | 196 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Mediterraneibacter | Mediterraneibacter gnavus | ||
| 22117974 | 22117974 | PRJNA453111_P_NODE_658_length_1009_cov_1.802350_g598_i0 | PRJNA453111 | 658 | 1009 | 1.80235 | 18.1857115 | Enterococcus | 1350 | Bacteria | Bacteria | 390 | 8.249999999999998e-132 | NR | WP_413133017.1 | 37734 | g598 | i0 | 56.7 | 3.00891972249752 | 337 | 133 | 96.3 | 2 | 2 | 973 | 29 | 365 | WP_413133017.1 pectate lyase family protein [Enterococcus casseliflavus] | diamond | 3036 | 390 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus casseliflavus | ||
| 23393638 | 23393638 | PRJNA453111_P_NODE_3379_length_442_cov_1.691057_g3287_i0 | PRJNA453111 | 3379 | 442 | 1.691057 | 7.47447194 | Clostridium perfringens | 1502 | Bacteria | Bacteria | 52.8 | 0.043 | NTclustered | gi|2100434541|gb|CP075946.1| | 1502 | g3287 | i0 | 100 | 0.0633484162895928 | 28 | 0 | 6 | 0 | 54 | 81 | 34618 | 34645 | Clostridium perfringens strain 955/85 plasmid pCP955-85 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 27123620 | 27123620 | PRJNA453111_P_NODE_10182_length_251_cov_0.814607_g10090_i0 | PRJNA453111 | 10182 | 251 | 0.814607 | 2.04466357 | Brevibacterium | 1696 | Bacteria | Bacteria | 43.1 | 0.0277 | NR | WP_332839751.1 | 946573 | g10090 | i0 | 51.4 | 1.32669322709163 | 37 | 17 | 43 | 1 | 236 | 129 | 210 | 246 | WP_332839751.1 glycosyltransferase family 2 protein [Brevibacterium yomogidense] | diamond | 333 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium yomogidense | ||
| 27913410 | 27913410 | PRJNA453111_P_NODE_6345_length_321_cov_1.862903_g6253_i0 | PRJNA453111 | 6345 | 321 | 1.862903 | 5.97991863 | Enterococcus | 1350 | Bacteria | Bacteria | 124 | 9.619999999999999e-32 | NR | WP_413133017.1 | 37734 | g6253 | i0 | 55.8 | 1.94392523364486 | 104 | 45 | 97.2 | 1 | 3 | 314 | 206 | 308 | WP_413133017.1 pectate lyase family protein [Enterococcus casseliflavus] | diamond | 624 | 125 | 0.992 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus casseliflavus | ||
| 28402538 | 28402538 | PRJNA453111_P_NODE_8026_length_286_cov_0.995305_g7934_i0 | PRJNA453111 | 8026 | 286 | 0.995305 | 2.8465723 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 44.7 | 0.0139 | NR | QRN85737.1 | 2044939 | g7934 | i0 | 34.8 | 0.692307692307692 | 66 | 37 | 62.9 | 1 | 56 | 235 | 235 | 300 | QRN85737.1 InlB B-repeat-containing protein [Clostridia bacterium] | diamond | 198 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 28686971 | 28686971 | PRJNA453111_P_NODE_12687_length_242_cov_1.366864_g12595_i0 | PRJNA453111 | 12687 | 242 | 1.366864 | 3.30781088 | Enterococcus mundtii | 53346 | Bacteria | Bacteria | 48.9 | 2.35e-4 | NR | WP_010736445.1 | 53346 | g12595 | i0 | 35.7 | 3.47107438016529 | 70 | 45 | 86.8 | 0 | 213 | 4 | 22 | 91 | WP_010736445.1 pectate lyase family protein [Enterococcus mundtii] | diamond | 840 | 48.9 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus mundtii | ||
| 29002892 | 29002892 | PRJNA453111_P_NODE_12648_length_243_cov_0.894118_g12556_i0 | PRJNA453111 | 12648 | 243 | 0.894118 | 2.17270674 | Dactylosporangium fulvum | 53359 | Bacteria | Bacteria | 42.7 | 0.0363 | NR | WP_259862636.1 | 53359 | g12556 | i0 | 40 | 0.679012345679012 | 55 | 28 | 61.7 | 1 | 48 | 197 | 443 | 497 | WP_259862636.1 HNH endonuclease signature motif containing protein [Dactylosporangium fulvum] | diamond | 165 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Dactylosporangium | Dactylosporangium fulvum | ||
| 29223649 | 29223649 | PRJNA453111_P_NODE_12589_length_243_cov_0.905882_g12497_i0 | PRJNA453111 | 12589 | 243 | 0.905882 | 2.20129326 | Actinokineospora auranticolor | 155976 | Bacteria | Bacteria | 42.4 | 0.0477 | NR | PPK65354.1 | 155976 | g12497 | i0 | 31.2 | 0.950617283950617 | 77 | 52 | 93.8 | 1 | 243 | 16 | 23 | 99 | PPK65354.1 hypothetical protein CLV40_1146 [Actinokineospora auranticolor] | diamond | 231 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Actinokineospora | Actinokineospora auranticolor | ||
| 29444234 | 29444234 | PRJNA453111_P_NODE_1410_length_694_cov_1.621578_g1322_i0 | PRJNA453111 | 1410 | 694 | 1.621578 | 11.25375132 | Melissococcus plutonius | 33970 | Bacteria | Bacteria | 130 | 7.26e-32 | NR | WP_231849637.1 | 33970 | g1322 | i0 | 44.6 | 1.45244956772334 | 168 | 88 | 70.5 | 1 | 493 | 5 | 35 | 202 | WP_231849637.1 pectate lyase family protein [Melissococcus plutonius] | diamond | 1008 | 130 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Melissococcus | Melissococcus plutonius | ||
| 32415787 | 32415787 | PRJNA453111_P_NODE_12899_length_242_cov_0.911243_g12807_i0 | PRJNA453111 | 12899 | 242 | 0.911243 | 2.20520806 | Nesterenkonia massiliensis | 1232429 | Bacteria | Bacteria | 147 | 5.93e-39 | NR | WP_044494056.1 | 1232429 | g12807 | i0 | 97.5 | 0.991735537190083 | 80 | 2 | 99.2 | 0 | 242 | 3 | 324 | 403 | WP_044494056.1 UvrD-helicase domain-containing protein [Nesterenkonia massiliensis] | diamond | 240 | 147 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Nesterenkonia | Nesterenkonia massiliensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;