RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA453111" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA453111 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6819154 6819154 PRJNA453111_P_NODE_6806_length_311_cov_1.084034_g6714_i0 PRJNA453111 6806 311 1.084034 3.37134574 Haloglomus halophilum 2962672 Archaea Archaea 52.8 0.029   NTclustered gi|2273560679|gb|CP101166.1| 2962672 g6714 i0 100 0.090032154340836 28 0 9 0 156 183 2332029 2332056 Haloglomus halophilum strain ZY41 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus halophilum
17018669 17018669 PRJNA453111_P_NODE_10254_length_250_cov_0.870056_g10162_i0 PRJNA453111 10254 250 0.870056 2.17514 Halorubrum sp. 2020YC2 2836432 Archaea Archaea 52.8 0.023   NTclustered gi|2047351610|gb|CP076019.1| 2836432 g10162 i0 100 0.112 28 0 11 0 123 150 1110880 1110907 Halorubrum sp. 2020YC2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. 2020YC2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;