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contig_metadata

7 rows where bioproject = "PRJNA453111" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA453111 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13195074 13195074 PRJNA453111_P_NODE_7211_length_302_cov_1.008734_g7119_i0 PRJNA453111 7211 302 1.008734 3.04637668 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 134 9.76e-27   NTclustered gi|2794923360|ref|XM_067881981.1| 164328 g7119 i0 76.245 5.72847682119205 261 57 85 4 46 302 439 180 Phytophthora ramorum Calmodulin (KRP23_11430), partial mRNA blastn 1730 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
20843101 20843101 PRJNA453111_P_NODE_5157_length_356_cov_0.752650_g5065_i0 PRJNA453111 5157 356 0.75265 2.679434 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.034   NTclustered gi|145494759|ref|XM_001433337.1| 5888 g5065 i0 100 0.0786516853932584 28 0 8 0 137 164 1362 1389 Paramecium tetraurelia uncharacterized protein (GSPATT00006476001), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
22117977 22117977 PRJNA453111_P_NODE_6918_length_308_cov_1.663830_g6826_i0 PRJNA453111 6918 308 1.66383 5.1245964 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.029   NTclustered gi|2795027578|ref|XM_067926281.1| 4785 g6826 i0 100 0.0909090909090909 28 0 9 0 136 163 135 162 Phytophthora cinnamomi myosinlike protein (IUM83_02370), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27138903 27138903 PRJNA453111_P_NODE_12682_length_242_cov_1.461538_g12590_i0 PRJNA453111 12682 242 1.461538 3.53692196 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.00949   NR MES1907185.1 1215613 g12590 i0 75 0.347107438016529 28 7 34.7 0 2 85 23 50 MES1907185.1 hypothetical protein [Cercozoa sp. M6MM] diamond 84 44.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
27992193 27992193 PRJNA453111_P_NODE_11025_length_248_cov_0.880000_g10933_i0 PRJNA453111 11025 248 0.88 2.1824 Hyaloperonospora brassicae 162125 SAR_Eukaryotes SAR_Eukaryotes 54.7 2.41e-6   NR CAI5743125.1 162125 g10933 i0 38.6 5.18951612903226 70 32 71.4 1 1 177 369 438 CAI5743125.1 unnamed protein product [Hyaloperonospora brassicae] diamond 1287 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora brassicae
28907460 28907460 PRJNA453111_P_NODE_10928_length_248_cov_0.880000_g10836_i0 PRJNA453111 10928 248 0.88 2.1824 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 169 6.989999999999999e-47   NR KAG7350616.1 303405 g10836 i0 91.3 1.93548387096774 80 7 96.8 0 247 8 359 438 KAG7350616.1 UDP-glucuronosyltransferase [Nitzschia inconspicua] diamond 480 169 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
30424033 30424033 PRJNA453111_P_NODE_12613_length_243_cov_0.905882_g12521_i0 PRJNA453111 12613 243 0.905882 2.20129326 Nitzschia inconspicua 303405 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.07e-4   NR KAG7336972.1 303405 g12521 i0 41 1.92592592592593 78 37 96.3 2 236 3 62 130 KAG7336972.1 hypothetical protein IV203_017421 [Nitzschia inconspicua] diamond 468 49.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;