RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA453111" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA453111 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27661141 27661141 PRJNA453111_P_NODE_8064_length_285_cov_1.089623_g7972_i0 PRJNA453111 8064 285 1.089623 3.10542555 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 158 9.999999999999999e-43   NR XP_044560530.1 5763 g7972 i0 78.7 62.3473684210526 94 20 98.9 0 285 4 221 314 XP_044560530.1 uncharacterized protein FDP41_005144 [Naegleria fowleri] diamond 17769 159 0.993710691823899 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
32479150 32479150 PRJNA453111_P_NODE_10799_length_249_cov_0.875000_g10707_i0 PRJNA453111 10799 249 0.875 2.17875 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 65.5 2.25e-11   NR RNC47455.1 5693 g10707 i0 51.6 2.5421686746988 62 30 74.7 0 64 249 25 86 RNC47455.1 hypothetical protein TcCL_NonESM02644 [Trypanosoma cruzi] diamond 633 65.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;