RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA453111" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA453111 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31024006 31024006 PRJNA453111_P_NODE_11535_length_246_cov_0.890173_g11443_i0 PRJNA453111 11535 246 0.890173 2.18982558 Patescibacteria group bacterium 2052139 Bacteria Bacteria 42.4 0.0367   NR MEK7112689.1 2052139 g11443 i0 37.8 0.902439024390244 74 31 82.9 3 241 38 50 114 MEK7112689.1 hypothetical protein [Patescibacteria group bacterium] diamond 222 42.4 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31181616 31181616 PRJNA453111_P_NODE_12775_length_242_cov_0.911243_g12683_i0 PRJNA453111 12775 242 0.911243 2.20520806 Candidatus Rifleibacteriota bacterium 2053586 Bacteria Bacteria 43.1 0.0274   NR MBQ3644082.1 2053586 g12683 i0 32.9 0.867768595041322 70 46 86.8 1 5 214 630 698 MBQ3644082.1 CHASE2 domain-containing protein [Candidatus Rifleibacteriota bacterium] diamond 210 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;