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contig_metadata

4 rows where bioproject = "PRJNA451191", tax_phylum = "Candidatus Saccharimonadota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA451191 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
440779 440779 PRJNA451191_P_NODE_40681_length_223_cov_2.037037_g40410_i0 PRJNA451191 40681 223 2.037037 4.54259251 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 412 7.88e-111   NTclustered gi|837350690|gb|CP011211.1| 1619070 g40410 i0 100 473.286995515695 223 0 100 0 1 223 850109 849887 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 105543 412 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
440950 440950 PRJNA451191_P_NODE_46461_length_210_cov_0.872483_g46190_i0 PRJNA451191 46461 210 0.872483 1.8322143 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 263 7.82e-66   NTclustered gi|2874253873|emb|OY969928.1| 179883 g46190 i0 89.302 434.528571428571 215 16 100 7 1 210 599679 599467 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD04212.bin.c.13 genome assembly, chromosome: 1 blastn 91251 263 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
10644822 10644822 PRJNA451191_P_NODE_48089_length_208_cov_1.959184_g47818_i0 PRJNA451191 48089 208 1.959184 4.07510272 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 355 1.24e-93   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g47818 i0 97.596 100.730769230769 208 4 100 1 1 208 665630 665424 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 20952 355 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
20841485 20841485 PRJNA451191_P_NODE_15097_length_376_cov_1.755556_g14826_i0 PRJNA451191 15097 376 1.755556 6.60089056 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 695 0   NTclustered gi|837350690|gb|CP011211.1| 1619070 g14826 i0 100 278.103723404255 376 0 100 0 1 376 850786 850411 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 104567 695 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;