RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA451191", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA451191 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27138899 27138899 PRJNA451191_P_NODE_49282_length_207_cov_1.438356_g49011_i0 PRJNA451191 49282 207 1.438356 2.97739692 Terriglobales bacterium 2282142 Bacteria Bacteria 42.7 0.0227   NR HWT98839.1 2282142 g49011 i0 40.5 0.608695652173913 42 24 59.4 1 41 163 349 390 HWT98839.1 hypothetical protein [Terriglobales bacterium] diamond 126 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27992191 27992191 PRJNA451191_P_NODE_50865_length_206_cov_0.896552_g50594_i0 PRJNA451191 50865 206 0.896552 1.84689712 Terracidiphilus sp. 1964191 Bacteria Bacteria 42 0.0369   NR HEX3893628.1 1964191 g50594 i0 47.5 0.58252427184466 40 21 58.3 0 4 123 147 186 HEX3893628.1 hypothetical protein [Terracidiphilus sp.] diamond 120 42 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;