RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA451191", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA451191 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1092759 1092759 PRJNA451191_P_NODE_6901_length_598_cov_3.104283_g6634_i0 PRJNA451191 6901 598 3.104283 18.56361234 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.016   NTclustered gi|2785757308|ref|XM_067215750.1| 5824 g6634 i0 100 0.096989966555184 29 0 5 0 570 598 883 911 Plasmodium brasilianum Cg2 protein (MKS88_000468), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium brasilianum
23393371 23393371 PRJNA451191_P_NODE_56459_length_193_cov_4.681818_g56188_i0 PRJNA451191 56459 193 4.681818 9.03590874 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|1620167712|ref|XM_028681606.1| 880535 g56188 i0 94.444 0.186528497409326 36 1 18 1 32 66 15000 14965 Plasmodium sp. gorilla clade G2 E3 ubiquitin-protein ligase, putative (PADL01_0825300), partial mRNA blastn 36 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;