contig_metadata
18 rows where bioproject = "PRJNA451191" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1714839 | 1714839 | PRJNA451191_P_NODE_18602_length_334_cov_2.622711_g18331_i0 | PRJNA451191 | 18602 | 334 | 2.622711 | 8.75985474 | Kolteria novifilia | 2527975 | Bacteria | Bacteria | 291 | 6.129999999999998e-74 | NTclustered | gi|1712629967|gb|CP036279.1| | 2527975 | g18331 | i0 | 86.567 | 78.4221556886228 | 268 | 30 | 79 | 4 | 72 | 334 | 1830709 | 1830443 | Planctomycetes bacterium Pan216 chromosome, complete genome | blastn | 26193 | 291 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Kolteriales | Kolteriaceae | Kolteria | Kolteria novifilia | |
| 7470597 | 7470597 | PRJNA451191_P_NODE_18406_length_336_cov_4.825455_g18135_i0 | PRJNA451191 | 18406 | 336 | 4.825455 | 16.2135288 | Simkaniaceae | 92712 | Bacteria | Bacteria | 499 | 9.42e-137 | NTclustered | gi|1214145827|gb|KY427067.1| | 504270 | g18135 | i0 | 93.548 | 104.125 | 341 | 12 | 100 | 9 | 1 | 336 | 3421 | 3756 | Candidatus Syngnamydia salmonis isolate H03/14Pp 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer 23S ribosomal RNA and 5S ribosomal RNA genes, complete sequence | blastn | 34986 | 499 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Syngnamydia | Candidatus Syngnamydia salmonis | |
| 7470641 | 7470641 | PRJNA451191_P_NODE_28046_length_268_cov_2.502415_g27775_i0 | PRJNA451191 | 28046 | 268 | 2.502415 | 6.7064722 | Candidatus Syngnamydia | 1803801 | Bacteria | Bacteria | 451 | 2.07e-122 | NTclustered | gi|2041293252|gb|CP073763.1| | 2698248 | g27775 | i0 | 97.015 | 137.977611940299 | 268 | 8 | 100 | 0 | 1 | 268 | 6629 | 6362 | MAG: Simkaniaceae bacterium isolate M30B1 chromosome, complete genome | blastn | 36978 | 451 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkaniaceae bacterium | ||
| 8092890 | 8092890 | PRJNA451191_P_NODE_12187_length_426_cov_1.224658_g11916_i0 | PRJNA451191 | 12187 | 426 | 1.224658 | 5.21704308 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g11916 | i0 | 95.508 | 69.1807511737089 | 423 | 19 | 99 | 0 | 4 | 426 | 3558061 | 3557639 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 29471 | 676 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 9369006 | 9369006 | PRJNA451191_P_NODE_55868_length_198_cov_2.598540_g55597_i0 | PRJNA451191 | 55868 | 198 | 2.59854 | 5.1451092 | Rosistilla carotiformis | 2528017 | Bacteria | Bacteria | 172 | 1.26e-38 | NTclustered | gi|1712756907|gb|CP036348.1| | 2528017 | g55597 | i0 | 85.89 | 69.2777777777778 | 163 | 21 | 82 | 2 | 1 | 162 | 1459841 | 1460002 | Rosistilla carotiformis strain Poly24 chromosome | blastn | 13717 | 172 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Rosistilla | Rosistilla carotiformis | |
| 11295810 | 11295810 | PRJNA451191_P_NODE_35289_length_239_cov_3.022472_g35018_i0 | PRJNA451191 | 35289 | 239 | 3.022472 | 7.22370808 | Simkaniaceae | 92712 | Bacteria | Bacteria | 350 | 6.8e-92 | NTclustered | gi|31747861|gb|AY140910.1| | 206681 | g35018 | i0 | 92.975 | 217.732217573222 | 242 | 13 | 100 | 2 | 1 | 239 | 7114 | 6874 | Candidatus Fritschea bemisiae strain Falk YaeL (yaeL) gene, partial cds; putative glycosylhydrolase and putative transposase genes, complete cds; 16S ribosomal RNA and 23S ribosomal RNA genes, complete sequence; putative endonuclease gene, complete cds; 5S ribosomal RNA gene, complete sequence; argynyl tRNA synthetase (argS), YjeE (yjeE), probable GTP-binding protein, DNA polymerase III epsilon subunit, and phosphoglycerate kinase (pgk) genes, complete cds; and unknown gene | blastn | 52038 | 350 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Candidatus Fritschea | Candidatus Fritschea bemisiae | |
| 13846153 | 13846153 | PRJNA451191_P_NODE_17751_length_343_cov_2.450355_g17480_i0 | PRJNA451191 | 17751 | 343 | 2.450355 | 8.40471765 | Simkaniaceae | 92712 | Bacteria | Bacteria | 545 | 1.22e-150 | NTclustered | gi|124021662|gb|EF177461.1| | 420390 | g17480 | i0 | 95.614 | 95.2973760932945 | 342 | 12 | 99 | 3 | 2 | 342 | 3421 | 3082 | Chlamydiales symbiont of Xenoturbella westbladi 16S ribosomal RNA gene, partial sequence; 23S ribosomal RNA gene, complete sequence; and putative homing endonuclease gene, complete cds | blastn | 32687 | 545 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Chlamydiales symbiont of Xenoturbella westbladi | ||
| 14469413 | 14469413 | PRJNA451191_P_NODE_41252_length_222_cov_1.211180_g40981_i0 | PRJNA451191 | 41252 | 222 | 1.21118 | 2.6888196 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 206 | 1.43e-48 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g40981 | i0 | 83.482 | 506.864864864865 | 224 | 34 | 100 | 3 | 1 | 222 | 7051812 | 7052034 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 112524 | 206 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 18292231 | 18292231 | PRJNA451191_P_NODE_35855_length_238_cov_1.152542_g35584_i0 | PRJNA451191 | 35855 | 238 | 1.152542 | 2.74304996 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 329 | 8.82e-86 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g35584 | i0 | 91.983 | 283.957983193277 | 237 | 16 | 98 | 2 | 5 | 238 | 3804523 | 3804759 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 67582 | 329 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 18944095 | 18944095 | PRJNA451191_P_NODE_16415_length_358_cov_2.622896_g16144_i0 | PRJNA451191 | 16415 | 358 | 2.622896 | 9.38996768 | Parachlamydia | 83551 | Bacteria | Bacteria | 436 | 8.01e-118 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g16144 | i0 | 92.739 | 121.877094972067 | 303 | 20 | 84 | 2 | 57 | 358 | 402 | 703 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 43632 | 440 | 0.990909090909091 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 19565554 | 19565554 | PRJNA451191_P_NODE_12316_length_423_cov_2.378453_g12045_i0 | PRJNA451191 | 12316 | 423 | 2.378453 | 10.06085619 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 749 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g12045 | i0 | 98.582 | 89.0851063829787 | 423 | 6 | 100 | 0 | 1 | 423 | 3556760 | 3557182 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 37683 | 749 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 20842738 | 20842738 | PRJNA451191_P_NODE_53377_length_203_cov_1.802817_g53106_i0 | PRJNA451191 | 53377 | 203 | 1.802817 | 3.65971851 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 353 | 4.33e-93 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g53106 | i0 | 98.03 | 37.512315270936 | 203 | 4 | 100 | 0 | 1 | 203 | 3556729 | 3556527 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 7615 | 353 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 22116525 | 22116525 | PRJNA451191_P_NODE_20018_length_321_cov_1.746154_g19747_i0 | PRJNA451191 | 20018 | 321 | 1.746154 | 5.60515434 | Telmatocola sphagniphila | 1123043 | Bacteria | Bacteria | 268 | 2.7499999999999998e-67 | NTclustered | gi|2041266541|gb|CP074694.1| | 1123043 | g19747 | i0 | 83.007 | 94.0591900311527 | 306 | 42 | 93 | 10 | 22 | 321 | 3724183 | 3723882 | Telmatocola sphagniphila strain SP2T chromosome, complete genome | blastn | 30193 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Telmatocola | Telmatocola sphagniphila | |
| 24666976 | 24666976 | PRJNA451191_P_NODE_42060_length_219_cov_2.582278_g41789_i0 | PRJNA451191 | 42060 | 219 | 2.582278 | 5.65518882 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 405 | 1.29e-108 | NTclustered | gi|262409996|gb|GU074172.1| | 305355 | g41789 | i0 | 100 | 100.114155251142 | 219 | 0 | 100 | 0 | 1 | 219 | 392 | 174 | Uncultured Chlamydiae bacterium clone 2H69 16S ribosomal RNA gene, partial sequence | blastn | 21925 | 405 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 29633505 | 29633505 | PRJNA451191_P_NODE_54190_length_203_cov_0.915493_g53919_i0 | PRJNA451191 | 54190 | 203 | 0.915493 | 1.85845079 | Victivallales bacterium | 2212475 | Bacteria | Bacteria | 40 | 0.0224 | NR | MBR4901995.1 | 2212475 | g53919 | i0 | 39 | 0.605911330049261 | 41 | 23 | 57.6 | 1 | 35 | 151 | 3 | 43 | MBR4901995.1 hypothetical protein [Victivallales bacterium] | diamond | 123 | 40 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Victivallales | Victivallales bacterium | |||
| 29760045 | 29760045 | PRJNA451191_P_NODE_47531_length_209_cov_0.878378_g47260_i0 | PRJNA451191 | 47531 | 209 | 0.878378 | 1.83581002 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42 | 0.0446 | NR | MFN5655454.1 | 2026799 | g47260 | i0 | 32.7 | 0.789473684210526 | 55 | 35 | 78.9 | 1 | 43 | 207 | 354 | 406 | MFN5655454.1 oligosaccharide flippase family protein [Verrucomicrobiota bacterium] | diamond | 165 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29791611 | 29791611 | PRJNA451191_P_NODE_34931_length_241_cov_1.288889_g34660_i0 | PRJNA451191 | 34931 | 241 | 1.288889 | 3.10622249 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 43.5 | 0.0184 | NR | MBI5425804.1 | 2026771 | g34660 | i0 | 44.7 | 1.1701244813278 | 47 | 26 | 58.5 | 0 | 39 | 179 | 247 | 293 | MBI5425804.1 MFS transporter [Opitutia bacterium] | diamond | 282 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 31972662 | 31972662 | PRJNA451191_P_NODE_47478_length_209_cov_0.878378_g47207_i0 | PRJNA451191 | 47478 | 209 | 0.878378 | 1.83581002 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 54.7 | 9.04e-7 | NR | MCW5559863.1 | 2499141 | g47207 | i0 | 74.4 | 1.10526315789474 | 39 | 10 | 56 | 0 | 91 | 207 | 8 | 46 | MCW5559863.1 type II secretion system protein [Verrucomicrobiia bacterium] | diamond | 231 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;