RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA450343" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA450343 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20840642 20840642 PRJNA450343_P_NODE_1197_length_509_cov_2.091304_g1130_i0 PRJNA450343 1197 509 2.091304 10.64473736 Natronorubrum daqingense 588898 Archaea Archaea 69.4 4.95e-7   NTclustered gi|1134979927|gb|CP019327.1| 588898 g1130 i0 85.294 0.133595284872299 68 8 13 2 252 318 592885 592951 Natronorubrum daqingense strain JX313, complete sequence blastn 68 69.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense
27029051 27029051 PRJNA450343_P_NODE_1742_length_418_cov_4.016260_g1674_i0 PRJNA450343 1742 418 4.01626 16.7879668 root 1 Root_unresolved Root_unresolved 70.9 3.61e-11   NR MCX8190482.1 2026736 g1674 i0 58.3 1.19138755980861 48 19 34.4 1 329 186 371 417 MCX8190482.1 Kazal-type serine protease inhibitor domain-containing protein [Candidatus Iainarchaeum archaeon] diamond 498 71.6 0.990223463687151 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon
29791601 29791601 PRJNA450343_P_NODE_1651_length_430_cov_3.719160_g1583_i0 PRJNA450343 1651 430 3.71916 15.992388 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 68.9 1.96e-10   NR MDP2974217.1 2026736 g1583 i0 52.4 0.43953488372093 63 24 39.8 2 75 245 160 222 MDP2974217.1 Kazal-type serine protease inhibitor family protein [Candidatus Iainarchaeum archaeon] diamond 189 68.9 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;