RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA450343" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30297749 30297749 PRJNA450343_P_NODE_7172_length_201_cov_1.269737_g7104_i0 PRJNA450343 7172 201 1.269737 2.55217137 Dispira parvispora 1520584 Fungi Fungi 56.6 4.31e-8   NR KAJ1968700.1 1520584 g7104 i0 46.2 4.8955223880597 65 35 97 0 196 2 26 90 KAJ1968700.1 vacuolar ATPase V0 domain subunit c, partial [Dispira parvispora] diamond 984 56.6 1 Eukaryota Opisthokonta Fungi Zoopagomycota Dimargaritomycetes Dimargaritales Dimargaritaceae Dispira Dispira parvispora
32715957 32715957 PRJNA450343_P_NODE_4120_length_262_cov_0.957746_g4052_i0 PRJNA450343 4120 262 0.957746 2.50929452 Fungi 4751 Fungi Fungi 122 9.26e-33   NR XP_051394734.1 61397 g4052 i0 63.2 72.675572519084 87 32 99.6 0 1 261 28 114 XP_051394734.1 rab protein 6 [Kickxella alabastrina] diamond 19041 122 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;