RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA450343" and tax_phylum = "Nemertea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nemertea · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA450343 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11917784 11917784 PRJNA450343_P_NODE_1930_length_396_cov_2.057637_g1862_i0 PRJNA450343 1930 396 2.057637 8.14824252 Lineus longissimus 88925 Nemertea other_Eukaryota 333 1.21e-86   NTclustered gi|2724533766|ref|XM_064768374.1| 88925 g1862 i0 85.185 18.1136363636364 324 48 82 0 1 324 376 53 PREDICTED: Lineus longissimus histone H2A.V (LOC135485947), mRNA blastn 7173 333 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
11917817 11917817 PRJNA450343_P_NODE_5530_length_226_cov_1.440678_g5462_i0 PRJNA450343 5530 226 1.440678 3.25593228 Lineus longissimus 88925 Nemertea other_Eukaryota 226 1.12e-54   NTclustered gi|2724592806|ref|XM_064775528.1| 88925 g5462 i0 85.068 17.1991150442478 221 33 98 0 1 221 1099 1319 PREDICTED: Lineus longissimus serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like (LOC135489900), transcript variant X3, mRNA blastn 3887 226 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
17016379 17016379 PRJNA450343_P_NODE_4594_length_248_cov_1.025126_g4526_i0 PRJNA450343 4594 248 1.025126 2.54231248 Lineus longissimus 88925 Nemertea other_Eukaryota 161 3.5699999999999995e-35   NTclustered gi|2724535822|ref|XM_064778075.1| 88925 g4526 i0 84.024 6.15322580645161 169 25 68 2 78 245 85 252 PREDICTED: Lineus longissimus WW domain-binding protein 11-like (LOC135492013), mRNA blastn 1526 161 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
27234126 27234126 PRJNA450343_P_NODE_2003_length_389_cov_2.867647_g1935_i0 PRJNA450343 2003 389 2.867647 11.15514683 Lineus longissimus 88925 Nemertea other_Eukaryota 43.5 0.0197   NR XP_064644876.1 88925 g1935 i0 28.6 0.701799485861183 91 60 70.2 2 91 363 21 106 XP_064644876.1 normal mucosa of esophagus-specific gene 1 protein-like [Lineus longissimus] diamond 273 43.5 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
28434156 28434156 PRJNA450343_P_NODE_10866_length_167_cov_0.864407_g10798_i0 PRJNA450343 10866 167 0.864407 1.44355969 Lineus longissimus 88925 Nemertea other_Eukaryota 58.2 2.29e-8   NR XP_064628939.1 88925 g10798 i0 57.4 0.844311377245509 47 20 84.4 0 153 13 160 206 XP_064628939.1 ras-related and estrogen-regulated growth inhibitor-like [Lineus longissimus] diamond 141 58.2 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus
28623723 28623723 PRJNA450343_P_NODE_6147_length_216_cov_0.934132_g6079_i0 PRJNA450343 6147 216 0.934132 2.01772512 Cerebratulus lacteus 6221 Nemertea other_Eukaryota 135 1.1e-37   NR ALI58375.1 6221 g6079 i0 85.9 1.97222222222222 71 10 98.6 0 213 1 181 251 ALI58375.1 ribosomal protein S4, partial [Cerebratulus lacteus] diamond 426 135 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Cerebratulus Cerebratulus lacteus
31751102 31751102 PRJNA450343_P_NODE_9857_length_173_cov_1.645161_g9789_i0 PRJNA450343 9857 173 1.645161 2.84612853 Lineus longissimus 88925 Nemertea other_Eukaryota 54.7 8.7e-7   NR XP_064622370.1 88925 g9789 i0 54.8 0.728323699421965 42 19 72.8 0 172 47 353 394 XP_064622370.1 small ribosomal subunit protein uS5m-like [Lineus longissimus] diamond 126 54.7 1 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus longissimus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;