contig_metadata
23 rows where bioproject = "PRJNA450343" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 439058 | 439058 | PRJNA450343_P_NODE_11521_length_166_cov_0.871795_g11453_i0 | PRJNA450343 | 11521 | 166 | 0.871795 | 1.4471797 | Spirosoma montaniterrae | 1178516 | Bacteria | Bacteria | 145 | 2.23e-30 | NTclustered | gi|1142450876|gb|CP014263.1| | 1178516 | g11453 | i0 | 86.029 | 2.31325301204819 | 136 | 18 | 81 | 1 | 1 | 135 | 3065608 | 3065743 | Spirosoma montaniterrae strain DY10 chromosome, complete genome | blastn | 384 | 145 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Cytophagaceae | Spirosoma | Spirosoma montaniterrae | |
| 439121 | 439121 | PRJNA450343_P_NODE_6521_length_209_cov_1.931250_g6453_i0 | PRJNA450343 | 6521 | 209 | 1.93125 | 4.0363125 | Flavisolibacter tropicus | 1492898 | Bacteria | Bacteria | 259 | 1.01e-64 | NTclustered | gi|1028466201|gb|CP011390.1| | 1492898 | g6453 | i0 | 89.1 | 97.0047846889952 | 211 | 20 | 100 | 3 | 1 | 209 | 1743855 | 1743646 | Flavisolibacter tropicus strain LCS9 chromosome, complete genome | blastn | 20274 | 259 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flavisolibacter | Flavisolibacter tropicus | |
| 1092516 | 1092516 | PRJNA450343_P_NODE_6361_length_212_cov_1.085890_g6293_i0 | PRJNA450343 | 6361 | 212 | 1.08589 | 2.3020868 | Cloacibacterium | 501783 | Bacteria | Bacteria | 392 | 9.67e-105 | NTclustered | gi|2040340748|emb|OU015321.1| | 2004710 | g6293 | i0 | 100 | 465.169811320755 | 212 | 0 | 100 | 0 | 1 | 212 | 1872547 | 1872336 | Cloacibacterium caeni isolate Isolate2 genome assembly, chromosome: 1 | blastn | 98616 | 392 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium caeni | |
| 5542818 | 5542818 | PRJNA450343_P_NODE_12505_length_164_cov_0.886957_g12437_i0 | PRJNA450343 | 12505 | 164 | 0.886957 | 1.45460948 | Bacteroidota | 976 | Bacteria | Bacteria | 86.3 | 3.22e-18 | NR | WP_092436094.1 | 1640674 | g12437 | i0 | 100 | 69.2012195121951 | 39 | 0 | 71.3 | 0 | 119 | 3 | 1 | 39 | WP_092436094.1 redox-regulated ATPase YchF [Williamwhitmania taraxaci] | diamond | 11349 | 86.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Williamwhitmaniaceae | Williamwhitmania | Williamwhitmania taraxaci | |
| 5542849 | 5542849 | PRJNA450343_P_NODE_4025_length_265_cov_1.671296_g3957_i0 | PRJNA450343 | 4025 | 265 | 1.671296 | 4.4289344 | Flavisolibacter tropicus | 1492898 | Bacteria | Bacteria | 424 | 4.46e-114 | NTclustered | gi|1028466201|gb|CP011390.1| | 1492898 | g3957 | i0 | 95.472 | 220.339622641509 | 265 | 12 | 100 | 0 | 1 | 265 | 1744504 | 1744768 | Flavisolibacter tropicus strain LCS9 chromosome, complete genome | blastn | 58390 | 424 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flavisolibacter | Flavisolibacter tropicus | |
| 6816809 | 6816809 | PRJNA450343_P_NODE_3066_length_307_cov_1.437984_g2998_i0 | PRJNA450343 | 3066 | 307 | 1.437984 | 4.41461088 | Chitinophaga filiformis | 104663 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|2230207502|gb|CP095855.1| | 104663 | g2998 | i0 | 96.774 | 0.100977198697068 | 31 | 1 | 10 | 0 | 275 | 305 | 2854947 | 2854917 | Chitinophaga filiformis strain YT5 chromosome, complete genome | blastn | 31 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophaga | Chitinophaga filiformis | |
| 6816859 | 6816859 | PRJNA450343_P_NODE_9326_length_179_cov_0.884615_g9258_i0 | PRJNA450343 | 9326 | 179 | 0.884615 | 1.58346085 | Flavobacterium sediminis | 2201181 | Bacteria | Bacteria | 309 | 8.15e-80 | NTclustered | gi|1391188358|gb|CP029463.1| | 2201181 | g9258 | i0 | 98.295 | 666.061452513967 | 176 | 3 | 100 | 0 | 4 | 179 | 454471 | 454296 | Flavobacterium sediminis strain MEBiC07310 chromosome, complete genome | blastn | 119225 | 309 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sediminis | |
| 8745498 | 8745498 | PRJNA450343_P_NODE_9627_length_176_cov_1.133858_g9559_i0 | PRJNA450343 | 9627 | 176 | 1.133858 | 1.99559008 | Flavobacterium | 237 | Bacteria | Bacteria | 326 | 7.92e-85 | NTclustered | gi|470491519|ref|NR_077042.1| | 55197 | g9559 | i0 | 100 | 490.102272727273 | 176 | 0 | 100 | 0 | 1 | 176 | 2639 | 2814 | Flavobacterium branchiophilum strain FL-15 23S ribosomal RNA gene, complete sequence | blastn | 86258 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium branchiophilum | |
| 9366967 | 9366967 | PRJNA450343_P_NODE_2348_length_355_cov_2.431373_g2280_i0 | PRJNA450343 | 2348 | 355 | 2.431373 | 8.63137415 | Flavisolibacter ginsenosidimutans | 661481 | Bacteria | Bacteria | 545 | 1.26e-150 | NTclustered | gi|1721662073|gb|CP042433.1| | 661481 | g2280 | i0 | 94.366 | 286.408450704225 | 355 | 20 | 100 | 0 | 1 | 355 | 4833091 | 4833445 | Flavisolibacter ginsenosidimutans strain Gsoil 636 chromosome, complete genome | blastn | 101675 | 545 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flavisolibacter | Flavisolibacter ginsenosidimutans | |
| 9366988 | 9366988 | PRJNA450343_P_NODE_5428_length_228_cov_1.195531_g5360_i0 | PRJNA450343 | 5428 | 228 | 1.195531 | 2.72581068 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 394 | 2.93e-105 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g5360 | i0 | 97.807 | 154.837719298246 | 228 | 5 | 100 | 0 | 1 | 228 | 3043524 | 3043297 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 35303 | 394 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 10642918 | 10642918 | PRJNA450343_P_NODE_2229_length_366_cov_1.485804_g2161_i0 | PRJNA450343 | 2229 | 366 | 1.485804 | 5.43804264 | Flavisolibacter ginsenosidimutans | 661481 | Bacteria | Bacteria | 499 | 1.03e-136 | NTclustered | gi|1721662073|gb|CP042433.1| | 661481 | g2161 | i0 | 91.328 | 242.497267759563 | 369 | 26 | 100 | 6 | 1 | 366 | 4832983 | 4832618 | Flavisolibacter ginsenosidimutans strain Gsoil 636 chromosome, complete genome | blastn | 88754 | 499 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flavisolibacter | Flavisolibacter ginsenosidimutans | |
| 15741677 | 15741677 | PRJNA450343_P_NODE_14153_length_159_cov_2.427273_g14085_i0 | PRJNA450343 | 14153 | 159 | 2.427273 | 3.85936407 | Hymenobacter sp. BRD128 | 2675878 | Bacteria | Bacteria | 244 | 2.02e-60 | NTclustered | gi|1847993467|gb|CP053908.1| | 2675878 | g14085 | i0 | 94.375 | 54.6477987421384 | 160 | 8 | 100 | 1 | 1 | 159 | 338226 | 338067 | Hymenobacter sp. BRD128 chromosome, complete genome | blastn | 8689 | 244 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sp. BRD128 | |
| 15741715 | 15741715 | PRJNA450343_P_NODE_6773_length_206_cov_0.974522_g6705_i0 | PRJNA450343 | 6773 | 206 | 0.974522 | 2.00751532 | Olleya sp. YS | 3028318 | Bacteria | Bacteria | 52.8 | 0.018 | NTclustered | gi|2487265598|gb|CP121685.1| | 3028318 | g6705 | i0 | 96.774 | 0.150485436893204 | 31 | 1 | 15 | 0 | 56 | 86 | 2841088 | 2841058 | Olleya sp. YS chromosome, complete genome | blastn | 31 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Olleya | Olleya sp. YS | |
| 17016384 | 17016384 | PRJNA450343_P_NODE_5454_length_227_cov_2.685393_g5386_i0 | PRJNA450343 | 5454 | 227 | 2.685393 | 6.09584211 | Chryseobacterium sp. KACC 21268 | 3025664 | Bacteria | Bacteria | 420 | 4.81e-113 | NTclustered | gi|2446111318|gb|CP117875.1| | 3025664 | g5386 | i0 | 100 | 358.577092511013 | 227 | 0 | 100 | 0 | 1 | 227 | 980680 | 980906 | Chryseobacterium sp. KACC 21268 chromosome, complete genome | blastn | 81397 | 420 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium sp. KACC 21268 | |
| 22115575 | 22115575 | PRJNA450343_P_NODE_1818_length_409_cov_0.908333_g1750_i0 | PRJNA450343 | 1818 | 409 | 0.908333 | 3.71508197 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 52.8 | 0.039 | NTclustered | gi|2621704993|emb|OY762280.1| | 2030927 | g1750 | i0 | 100 | 0.0684596577017115 | 28 | 0 | 7 | 0 | 234 | 261 | 102693 | 102720 | MAG: Bacteroidales bacterium isolate 20329f36-1aa7-4b1c-baf8-c582a14de254 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 23391282 | 23391282 | PRJNA450343_P_NODE_4239_length_258_cov_1.301435_g4171_i0 | PRJNA450343 | 4239 | 258 | 1.301435 | 3.3577023 | Panacibacter ginsenosidivorans | 1813871 | Bacteria | Bacteria | 339 | 1.6099999999999998e-88 | NTclustered | gi|1721657344|gb|CP042435.1| | 1813871 | g4171 | i0 | 90.661 | 179.290697674419 | 257 | 20 | 99 | 4 | 1 | 255 | 1673689 | 1673943 | Panacibacter ginsenosidivorans strain Gsoil1550 chromosome, complete genome | blastn | 46257 | 339 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Panacibacter | Panacibacter ginsenosidivorans | |
| 24665291 | 24665291 | PRJNA450343_P_NODE_4700_length_244_cov_3.358974_g4632_i0 | PRJNA450343 | 4700 | 244 | 3.358974 | 8.19589656 | Flavisolibacter ginsenosidimutans | 661481 | Bacteria | Bacteria | 444 | 3.11e-120 | NTclustered | gi|1721662073|gb|CP042433.1| | 661481 | g4632 | i0 | 99.588 | 240.819672131148 | 243 | 1 | 99 | 0 | 1 | 243 | 4833473 | 4833715 | Flavisolibacter ginsenosidimutans strain Gsoil 636 chromosome, complete genome | blastn | 58760 | 444 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flavisolibacter | Flavisolibacter ginsenosidimutans | |
| 25318724 | 25318724 | PRJNA450343_P_NODE_8040_length_191_cov_1.077465_g7972_i0 | PRJNA450343 | 8040 | 191 | 1.077465 | 2.05795815 | Flavobacterium | 237 | Bacteria | Bacteria | 350 | 5.2000000000000014e-92 | NTclustered | gi|1057916935|gb|CP012388.1| | 96345 | g7972 | i0 | 100 | 614.565445026178 | 189 | 0 | 99 | 0 | 1 | 189 | 2974682 | 2974494 | Flavobacterium psychrophilum strain Z1, complete genome | blastn | 117382 | 353 | 0.991501416430595 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium psychrophilum | |
| 27960441 | 27960441 | PRJNA450343_P_NODE_10745_length_167_cov_0.864407_g10677_i0 | PRJNA450343 | 10745 | 167 | 0.864407 | 1.44355969 | Ilyomonas limi | 2575867 | Bacteria | Bacteria | 89.7 | 6.740000000000001e-22 | NR | WP_137262738.1 | 2575867 | g10677 | i0 | 74.5 | 0.988023952095808 | 55 | 14 | 98.8 | 0 | 166 | 2 | 23 | 77 | WP_137262738.1 hypothetical protein [Ilyomonas limi] | diamond | 165 | 89.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Ilyomonas | Ilyomonas limi | |
| 30913966 | 30913966 | PRJNA450343_P_NODE_10474_length_168_cov_1.285714_g10406_i0 | PRJNA450343 | 10474 | 168 | 1.285714 | 2.15999952 | FCB group | 1783270 | Bacteria | Bacteria | 77.8 | 7.62e-17 | NR | HOP50557.1 | 2049428 | g10406 | i0 | 53.6 | 3 | 56 | 26 | 100 | 0 | 168 | 1 | 32 | 87 | HOP50557.1 thioredoxin [Ignavibacteriales bacterium] | diamond | 504 | 77.8 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteriales | Ignavibacteriales bacterium | |||
| 31134658 | 31134658 | PRJNA450343_P_NODE_6035_length_217_cov_2.476190_g5967_i0 | PRJNA450343 | 6035 | 217 | 2.47619 | 5.3733323 | root | 1 | Root_unresolved | Root_unresolved | 41.6 | 0.011 | NR | KIO77303.1 | 1503925 | g5967 | i0 | 31.8 | 3.64976958525346 | 66 | 44 | 89.9 | 1 | 216 | 22 | 2 | 67 | KIO77303.1 ubiquitin [Pedobacter lusitanus] | diamond | 792 | 41.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter lusitanus | |
| 32162649 | 32162649 | PRJNA450343_P_NODE_4938_length_239_cov_0.952632_g4870_i0 | PRJNA450343 | 4938 | 239 | 0.952632 | 2.27679048 | Algibacter sp. L4_22 | 2942477 | Bacteria | Bacteria | 105 | 1.86e-25 | NR | WP_368736185.1 | 2942477 | g4870 | i0 | 87.3 | 3.5020920502092 | 55 | 7 | 69 | 0 | 232 | 68 | 112 | 166 | WP_368736185.1 hypothetical protein [Algibacter sp. L4_22] | diamond | 837 | 105 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Algibacter | Algibacter sp. L4_22 | |
| 32289467 | 32289467 | PRJNA450343_P_NODE_1279_length_494_cov_2.240449_g1211_i0 | PRJNA450343 | 1279 | 494 | 2.240449 | 11.06781806 | Candidatus Aegiribacteria sp. | 2528271 | Bacteria | Bacteria | 95.1 | 2.96e-22 | NR | MFO8183585.1 | 2528271 | g1211 | i0 | 57.7 | 1.48785425101215 | 78 | 33 | 47.4 | 0 | 474 | 241 | 2 | 79 | MFO8183585.1 RNA-binding protein [Candidatus Aegiribacteria sp.] | diamond | 735 | 95.1 | 1 | Bacteria | FCB group | Pseudomonadati | Candidatus Aegiribacteria | Candidatus Aegiribacteria sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;