RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

24 rows where bioproject = "PRJNA448207", tax_phylum = "Platyhelminthes" and tax_superkingdom = "Eukaryota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Eukaryota · 24 ✖

tax_phylum 1

  • Platyhelminthes · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA448207 · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
438558 438558 PRJNA448207_P_NODE_14841_length_330_cov_1.198444_g14678_i0 PRJNA448207 14841 330 1.198444 3.9548652 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 333 9.909999999999998e-87   NTclustered gi|1373861866|ref|XM_024497310.1| 6210 g14678 i0 99.454 0.927272727272727 183 1 55 0 1 183 150 332 Echinococcus granulosus hypothetical protein (EGR_08061), partial mRNA blastn 306 333 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
4265797 4265797 PRJNA448207_P_NODE_27244_length_249_cov_0.875000_g27081_i0 PRJNA448207 27244 249 0.875 2.17875 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 353 5.52e-93   NTclustered gi|1373859962|ref|XM_024496358.1| 6210 g27081 i0 100 1.14859437751004 191 0 100 0 1 191 5880 5690 Echinococcus granulosus Ras-specific guanine nucleotide-releasing factor (EGR_07109), partial mRNA blastn 286 353 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
4920650 4920650 PRJNA448207_S_NODE_1204_length_390_cov_1.000000_g1193_i0 PRJNA448207 1204 390 1 3.9 Metazoa 33208 Platyhelminthes Platyhelminthes 58.4 8.01e-4   NTclustered gi|690513916|emb|LN064537.1| 99802 g1193 i0 100 6.88717948717949 31 0 8 0 189 219 1880 1910 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0002114 blastn 2686 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5542601 5542601 PRJNA448207_P_NODE_305_length_1594_cov_3.134780_g278_i0 PRJNA448207 305 1594 3.13478 49.9683932 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 392 2.36e-122   NR CDS31835.1 85433 g278 i0 40.5 6.10539523212045 484 242 83 8 1588 266 345 825 CDS31835.1 Papilin [Hymenolepis microstoma] diamond 9732 392 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
6816754 6816754 PRJNA448207_S_NODE_26_length_1696_cov_3.533580_g24_i0 PRJNA448207 26 1696 3.53358 59.9295168 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 394 2.52e-122   NR CDS31835.1 85433 g24 i0 40.3 5.75766509433962 491 247 79.2 8 36 1379 338 825 CDS31835.1 Papilin [Hymenolepis microstoma] diamond 9765 394 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
9366862 9366862 PRJNA448207_P_NODE_7108_length_456_cov_1.151436_g6946_i0 PRJNA448207 7108 456 1.151436 5.25054816 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.044   NTclustered gi|687163270|emb|LN038880.1| 99802 g6946 i0 100 0.0614035087719298 28 0 6 0 327 354 741 768 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0037985 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
10642581 10642581 PRJNA448207_P_NODE_23909_length_260_cov_1.577540_g23746_i0 PRJNA448207 23909 260 1.57754 4.101604 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 327 3.52e-85   NTclustered gi|1373845992|ref|XM_024489373.1| 6210 g23746 i0 100 1.00384615384615 177 0 100 0 84 260 1044 868 Echinococcus granulosus tRNA-specific adenosine deaminase-like protein (EGR_00124), partial mRNA blastn 261 327 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
11917380 11917380 PRJNA448207_P_NODE_1930_length_830_cov_7.190225_g1804_i0 PRJNA448207 1930 830 7.190225 59.6788675 Metazoa 33208 Platyhelminthes Platyhelminthes 528 5.729999999999999e-188   NR CAX70940.1 6182 g1804 i0 96.6 160.579518072289 264 9 95.4 0 38 829 1 264 CAX70940.1 putative tubulin, beta, 2 [Schistosoma japonicum] diamond 133281 531 0.994350282485876 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
17016138 17016138 PRJNA448207_P_NODE_30274_length_245_cov_0.895349_g30111_i0 PRJNA448207 30274 245 0.895349 2.19360505 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 211 3.45e-50   NTclustered gi|1373848276|ref|XM_024490515.1| 6210 g30111 i0 99.145 0.477551020408163 117 1 48 0 129 245 2103 1987 Echinococcus granulosus Splicing factor, arginine/serine-rich (EGR_01266), partial mRNA blastn 117 211 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
19564435 19564435 PRJNA448207_P_NODE_19796_length_289_cov_1.185185_g19633_i0 PRJNA448207 19796 289 1.185185 3.42518465 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 207 5.3900000000000004e-49   NTclustered gi|1373864244|ref|XM_024498499.1| 6210 g19633 i0 91.447 40.757785467128 152 12 52 1 15 165 665 816 Echinococcus granulosus hypothetical protein (EGR_09250), partial mRNA blastn 11779 207 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
27186965 27186965 PRJNA448207_S_NODE_2282_length_298_cov_1.711111_g2271_i0 PRJNA448207 2282 298 1.711111 5.09911078 Diphyllobothriidae 28843 Platyhelminthes Platyhelminthes 50.1 9.53e-5   NR VDN10303.1 60516 g2271 i0 40.3 1.97315436241611 67 39 66.4 1 5 202 111 177 VDN10303.1 unnamed protein product [Dibothriocephalus latus] diamond 588 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus
27377100 27377100 PRJNA448207_S_NODE_3963_length_242_cov_0.911243_g3952_i0 PRJNA448207 3963 242 0.911243 2.20520806 Metazoa 33208 Platyhelminthes Platyhelminthes 91.7 2.22e-19   NR XP_009163574.1 6198 g3952 i0 84.3 11.4669421487603 51 8 63.2 0 237 85 614 664 XP_009163574.1 hypothetical protein T265_01304 [Opisthorchis viverrini] diamond 2775 92.4 0.992424242424242 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
27518444 27518444 PRJNA448207_P_NODE_13543_length_343_cov_0.962963_g13380_i0 PRJNA448207 13543 343 0.962963 3.30296309 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 58.9 2.54e-7   NR PAA59296.1 282301 g13380 i0 50 0.769679300291545 44 22 38.5 0 14 145 285 328 PAA59296.1 hypothetical protein BOX15_Mlig029643g1 [Macrostomum lignano] diamond 264 58.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
27644927 27644927 PRJNA448207_P_NODE_16944_length_311_cov_1.491597_g16781_i0 PRJNA448207 16944 311 1.491597 4.63886667 Trichobilharzia regenti 157069 Platyhelminthes Platyhelminthes 52.4 2.12e-6   NR VDQ17541.1 157069 g16781 i0 65.1 3.58842443729904 43 15 41.5 0 299 171 7 49 VDQ17541.1 unnamed protein product [Trichobilharzia regenti] diamond 1116 52.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
28086632 28086632 PRJNA448207_P_NODE_10625_length_381_cov_0.814935_g10463_i0 PRJNA448207 10625 381 0.814935 3.10490235 Echinostoma caproni 27848 Platyhelminthes Platyhelminthes 65.5 7.91e-10   NR VDP92820.1 27848 g10463 i0 35.1 2.21259842519685 74 48 58.3 0 367 146 101 174 VDP92820.1 unnamed protein product [Echinostoma caproni] diamond 843 65.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Echinostomatidae Echinostoma Echinostoma caproni
28307866 28307866 PRJNA448207_S_NODE_66_length_1201_cov_2.221631_g64_i0 PRJNA448207 66 1201 2.221631 26.68178831 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 52.8 0.00165   NR CDS27810.1 85433 g64 i0 28.4 0.654454621149043 116 68 25.2 5 1188 886 219 334 CDS27810.1 trypsin-like protease [Hymenolepis microstoma] diamond 786 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
29381299 29381299 PRJNA448207_P_NODE_27229_length_249_cov_0.875000_g27066_i0 PRJNA448207 27229 249 0.875 2.17875 Trichobilharzia szidati 157070 Platyhelminthes Platyhelminthes 48.9 2.68e-4   NR CAH8843533.1 157070 g27066 i0 40 1.02409638554217 85 38 86.7 3 8 223 711 795 CAH8843533.1 unnamed protein product [Trichobilharzia szidati] diamond 255 48.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia szidati
29555238 29555238 PRJNA448207_S_NODE_250_length_745_cov_4.187500_g241_i0 PRJNA448207 250 745 4.1875 31.196875 Metazoa 33208 Platyhelminthes Platyhelminthes 496 1.6399999999999995e-175   NR CAX70940.1 6182 g241 i0 96.4 179.758389261745 248 9 99.9 0 2 745 13 260 CAX70940.1 putative tubulin, beta, 2 [Schistosoma japonicum] diamond 133920 498 0.995983935742972 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
30075946 30075946 PRJNA448207_S_NODE_2932_length_269_cov_1.071429_g2921_i0 PRJNA448207 2932 269 1.071429 2.88214401 Mesocestoides corti 53468 Platyhelminthes Platyhelminthes 53.1 1.03e-5   NR VDD82014.1 53468 g2921 i0 41.7 2.81040892193309 84 34 93.7 2 257 6 1 69 VDD82014.1 unnamed protein product [Mesocestoides corti] diamond 756 53.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
30945519 30945519 PRJNA448207_P_NODE_14174_length_336_cov_1.615970_g14011_i0 PRJNA448207 14174 336 1.61597 5.4296592 Opisthorchiidae 6196 Platyhelminthes Platyhelminthes 52 1.38e-5   NR OON18335.1 6198 g14011 i0 40.3 1.28571428571429 72 43 64.3 0 89 304 17 88 OON18335.1 hypothetical protein X801_05811 [Opisthorchis viverrini] diamond 432 52 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
31197735 31197735 PRJNA448207_P_NODE_14775_length_331_cov_0.968992_g14612_i0 PRJNA448207 14775 331 0.968992 3.20736352 Plagiorchiida 27871 Platyhelminthes Platyhelminthes 79.7 6.47e-17   NR THD23308.1 6192 g14612 i0 43.9 5.8368580060423 82 46 74.3 0 324 79 7 88 THD23308.1 Dynein light chain cytoplasmic [Fasciola hepatica] diamond 1932 80.5 0.990062111801242 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
31419492 31419492 PRJNA448207_P_NODE_25036_length_252_cov_2.614525_g24873_i0 PRJNA448207 25036 252 2.614525 6.588603 Metazoa 33208 Platyhelminthes Platyhelminthes 99 6.21e-25   NR CAX74960.1 6182 g24873 i0 65.8 6.07142857142857 73 25 86.9 0 3 221 17 89 CAX74960.1 diazepam-binding inhibitor [Schistosoma japonicum] diamond 1530 99 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31609376 31609376 PRJNA448207_P_NODE_16996_length_311_cov_1.142857_g16833_i0 PRJNA448207 16996 311 1.142857 3.55428527 Metazoa 33208 Platyhelminthes Platyhelminthes 61.2 2.28e-8   NR VDD82014.1 53468 g16833 i0 41.5 2.62379421221865 94 49 90.7 1 308 27 22 109 VDD82014.1 unnamed protein product [Mesocestoides corti] diamond 816 61.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti
31719596 31719596 PRJNA448207_P_NODE_8637_length_418_cov_1.927536_g8475_i0 PRJNA448207 8637 418 1.927536 8.05710048 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 83.6 5.71e-16   NR PAA81674.1 282301 g8475 i0 56.2 1.06937799043062 73 32 52.4 0 343 125 26 98 PAA81674.1 hypothetical protein BOX15_Mlig021371g5, partial [Macrostomum lignano] diamond 447 83.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;