RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA448207" and tax_kingdom = "Heunggongvirae"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Heunggongvirae · 2 ✖

bioproject 1

  • PRJNA448207 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17670133 17670133 PRJNA448207_S_NODE_3434_length_251_cov_0.825843_g3423_i0 PRJNA448207 3434 251 0.825843 2.07286593 Viruses 10239 Viruses Viruses 104 6.19e-18   NTclustered gi|1386449979|gb|MG298870.1| 10376 g3423 i0 95.455 27.6334661354582 66 1 25 2 106 169 36567 36632 Human gammaherpesvirus 4 isolate JC_V005, partial genome blastn 6936 104 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
32574059 32574059 PRJNA448207_P_NODE_19919_length_288_cov_1.283721_g19756_i0 PRJNA448207 19919 288 1.283721 3.69711648 Myoviridae sp. ctLnO19 2825085 Viruses Viruses 42 0.0105   NR DAE00410.1 2825085 g19756 i0 69.2 0.270833333333333 26 8 27.1 0 114 37 20 45 DAE00410.1 MAG TPA: putative ACR protein [Myoviridae sp. ctLnO19] diamond 78 42 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Myoviridae sp. ctLnO19

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;