RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA448207", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA448207 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27360711 27360711 PRJNA448207_P_NODE_2243_length_780_cov_1.874116_g2110_i0 PRJNA448207 2243 780 1.874116 14.6181048 Coemansia aciculifera 417176 Fungi Fungi 70.1 9.95e-10   NR KAJ2886950.1 417176 g2110 i0 42.7 1.27307692307692 89 40 34.2 4 336 70 305 382 KAJ2886950.1 hypothetical protein H4R27_000273 [Coemansia aciculifera] diamond 993 70.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia aciculifera
29475733 29475733 PRJNA448207_P_NODE_7530_length_444_cov_1.514825_g7368_i0 PRJNA448207 7530 444 1.514825 6.725823 Neoconidiobolus thromboides FSU 785 1314799 Fungi Fungi 53.9 3.26e-5   NR KAI9291648.1 1314799 g7368 i0 32.4 1.81756756756757 136 86 90.5 2 42 443 195 326 KAI9291648.1 UBX-domain-containing protein [Neoconidiobolus thromboides FSU 785] diamond 807 53.9 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides
32527131 32527131 PRJNA448207_P_NODE_3799_length_608_cov_1.185047_g3642_i0 PRJNA448207 3799 608 1.185047 7.20508576 root 1 Root_unresolved Root_unresolved 153 1.87e-39   NR KAK9718456.1 34480 g3642 i0 49 31.8305921052632 149 76 73.5 0 43 489 516 664 KAK9718456.1 tetrahydrofolate synthase [Basidiobolus ranarum] diamond 19353 153 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;