RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA448207", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA448207 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14467500 14467500 PRJNA448207_P_NODE_32092_length_242_cov_1.366864_g31929_i0 PRJNA448207 32092 242 1.366864 3.30781088 Bacillati 1783272 Bacteria Bacteria 132 1.48e-33   NR MDQ2886929.1 2026724 g31929 i0 80 49.8595041322314 80 16 99.2 0 2 241 222 301 MDQ2886929.1 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit [Chloroflexota bacterium] diamond 12066 132 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31498338 31498338 PRJNA448207_S_NODE_2936_length_269_cov_0.994898_g2925_i0 PRJNA448207 2936 269 0.994898 2.67627562 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 43.1 0.0285   NR HEY8868810.1 2952938 g2925 i0 40.7 0.602230483271376 54 32 60.2 0 245 84 64 117 HEY8868810.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 162 43.1 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;